AMCG00012449


Basic Information

Item Value
gene id AMCG00012449
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 18323005 ~ 18326883 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012449
ATGGTCAGCCGAACCCAACCCGGGCCCAGATTCAGACAAGCGGCAGACCTGGAGCCCAGCGCCGACTCCACTGCGAGGATGGTGTGGGACGACCTGGCCAGGTGTGGGGCCGTGACTGCGGTGGCCGCTTTCAGTCTTTTTCTGTTGCGGAAGTGGATCTCGGGCGGGTCGTGCCGGAGCCGGGCGCGGCTGGACGGGAAAACGGTGCTGATCACCGGGGCCAATGGCGGCATCGGCAAGGAGACAGCGCGCGCGCGGGTGGTGATGGCGTGCCGGGACCTGGCCAAGGCGGAGGAGGTGGCGGTGGAGCTCCGGAGGGCCACGCACAACGGGAACATAGTGGTGCGCCACCTGGACTTGGCTTCGTTGTATTCCGTGCGCCAGTTCGCCCAGGACTTCAACCACAGCGAGGAGCGGCTGGACGTGCTCGTCAACAACGCTGggGTGATGATGTGTCCCAAGTGGACCACGGAGGATGGATTTGAGATGCAGCTGGCCGTCAATCACTTGAGCCACTTCCTGCTGACCAATCTGCTGCTGGACAAGCTCCAGAGTTCTGCCCCCAGCCGGGTGGTCAACGTGTCGAGCCTCACCCACAAAGGCGGCAAGATTCACTTTGAGGACATCTTCTTCGACAAGACGCCCTACAGTTCCCTGGTGAGCTACCGGCAGAGCAAACTGGCCGTGCTGCTGTTCTCCAGGGAGCTGGCGCGGAGGATGCGAGGGACAGGCGTGACCTCATACTCCCTCCACCCCGGGATCATCAACACCGAGCTGGGCCGCCACGTGCTGACGGGATACCCCCTGCTGAAGAAGTTCCTCTTCTCCCCCTCCATGCTGCTCATGAAGACTCCCACAGAAGGGGCCCAGACCAGCATCTACTGCGCGGTGACTGAGGGGCTGGAGGAGTACAGCGGCTGCTACTTCAGCGATTGTGCCCTGAAAAAGCCCGCTCCGGAGGGAATGGATGACGAGGCCGCCCGGCGCCTGTGGGACCTCAGCCTCCAGTTAGTGGGGCTACCAATGCACTGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012449 True 1032 mRNA 0.63 7 18323005 18326883

Neighbor

gene id symbol gene type direction distance location
AMCG00012448 vps45,LOC106588336 coding downstream 2032 18295215 ~ 18320973 (-)
AMCG00012441 NA coding downstream 45401 18261865 ~ 18277604 (-)
AMCG00012443 NA coding downstream 71999 18240923 ~ 18251006 (-)
AMCG00012444 NA coding downstream 115522 18195065 ~ 18207483 (-)
AMCG00012445 NA coding downstream 136210 18185723 ~ 18186795 (-)
AMCG00012450 psmb4 coding upstream 56795 18383678 ~ 18388229 (-)
AMCG00012455 fam63a coding upstream 143112 18469995 ~ 18476148 (-)
AMCG00012461 NA coding upstream 241966 18568849 ~ 18569085 (-)
AMCG00012463 NA coding upstream 268318 18595201 ~ 18601943 (-)
AMCG00012462 NA coding upstream 289030 18615913 ~ 18651892 (-)
G136826 NA non-coding downstream 143318 18140751 ~ 18179687 (-)
G136820 NA non-coding downstream 210102 18112676 ~ 18112903 (-)
G136746 NA non-coding downstream 351152 17912238 ~ 17971853 (-)
G136750 NA non-coding downstream 359761 17941472 ~ 17963244 (-)
G136623 NA non-coding downstream 638822 17682207 ~ 17684183 (-)
G136915 NA non-coding upstream 93126 18420009 ~ 18493905 (-)
G136906 NA non-coding upstream 112696 18439579 ~ 18442587 (-)
G136951 NA non-coding upstream 218035 18544918 ~ 18546313 (-)
G136955 NA non-coding upstream 226124 18553007 ~ 18556113 (-)
G136968 NA non-coding upstream 287156 18614039 ~ 18614257 (-)
G136837 NA other downstream 85749 18205375 ~ 18237256 (-)
AMCG00012437 LOC106580258 other downstream 220676 18098177 ~ 18102329 (-)
AMCG00012414 NA other downstream 543883 17767410 ~ 17779122 (-)
AMCG00012416 NA other downstream 558444 17757334 ~ 17764561 (-)
G136666 NA other downstream 598937 17720726 ~ 17724068 (-)
G136900 NA other upstream 48447 18375330 ~ 18378297 (-)
AMCG00012459 cdc42se1,LOC106569912,LOC106588345,LOC102790437 other upstream 189953 18516836 ~ 18537125 (-)
AMCG00012467 NA other upstream 600496 18927379 ~ 18933201 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other upstream 705720 19032603 ~ 19043449 (-)
G137199 NA other upstream 1115044 19441927 ~ 19507394 (-)

Expression


Co-expression Network