AMCG00012455 (fam63a)


Basic Information

Item Value
gene id AMCG00012455
gene name fam63a
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 18469995 ~ 18476148 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012455
ccccctccctagAAGCTGTACAATAATCCTCGGCAGGGTTTGGGGTGCTTGGCCACTCCGCCGCCTCCCTCTCCGGTATATAAACGACAACATCCACCTTCTTCAGCAGGCAGGCGGCCCGCAATGGCTGACGCCGGCGTGTGACGTCATTGTGCACGTACGTGACGGGCGGAAGTAGAGCAGGTGGAAACAACAACACTGCGAAACGGCGAGACGGGGGGGAAACGAAACAAAACGTACAGCCCCGCAGCCGATGGCGGAAAACTGATCAAAGACGTGGGGATGACACGACGAACCGTCCTCCGCCAGGGAACGCCATCTAAAAACCCCTGCGTGTGTGCGGGCGGATTCATGGCGACTCTTGCTCGCTACGTCATCCGCTATAGCGGTTCATATTGCGCCTTTAAAAGCCAGTCTAGTGTCGGATACCCCAGCCGTGGTGTCAACCTTATAGCAATGTCGCAAACTGGCCCAGTTGCGACACCCCGACTACAGAGGAGGACATCTGTGTATCGGTTTCCGAAACGCTATGGTGACTCGAATACCCTCGACGAAGGTACGACTGACTTGACCTTCAGTGGAAAATAAATCCGACGGTGCGAGTTCAAACCAGGCTCTCGCAATCCACACCTCTCCTCGTTTCTCCGAGTCTCAAACACTACATAGACGCCACAGGGCAGGGGAAGGGAGGTCGGGCATTGACGATAAATGTGATGCAAGAAGCACACAACAAAAGATGAGTGgtcttaattggttaattggtttTTAAttggggtttttgttttttagcccCATTCTATTTAAAACGCATCTTGTTCATCCTAAACCACAAATCGGAGGATAAAGGGACTTTAAATGTATCAGTCAGcgttttaattcagttttttttcttgtactaagcATTAAGctagagctgtatattttatatattcaacattgcaattatatttattctaaGATTAACACAGTTTTGTAAGCAAATGTTTTGTACGAAACCGTAACGTTGAGCATGCGGTTACTGCTAAATATTTTTGTGACAAGTACGACAAAGTAAAACTCGTCAAGCAAAAAGATTGTAAGaagagagcagggagaaggtgAAACCTATAAATCCACAGTGTCTTATTGCTAAAACTGTTAAATCCACATGATCGCACTATTTAATACTTAAGACTTAAGAATGCTGCCGTGTCCACTGGAGTCATAGCCGCCCCTGGTGTCATTTCTCTGGAAGTTCAAAATTGCCGTAACTCAGGAAtgtaaaagaggaaaaaaacacgCACAACAACATTTCAATATCTTTTGAATAGACACTTGTTCTTGCATCTGGCTTGGGTAGGATAGTGTTGAAGCATCCAAAAAAGCCTCTTTACTCAACACAATTCATCATCACTTAGGGATAAAACCTCAGTTTAAGATAaggccctgagagagagagagagaaatcgtGAAACCCCTTGGTTGTGTAGGGCAGAGGGCAAAGGTTGACCCGTGAACCCTCGTATTTCACATAACACCCCTGTTTGCCGAGCCATGGCCGACTGCAGCTCAGAGATCATCAACAGCGAGCCTCAGGGCGTCAACAAGGAGCAGCTGATGGAGACCGAGCCGGCGCCTGCTTGGAAAAGTGAACCGTCCACCGCGCTGCCCGCTGCAGAGGAAGAGCGTGCCGAGAAGCCAGGTGTAAGCGACGTGAAGGACAGGATGGAGCCGGCGGGCGCGGAAGATGCCGTCTCGGACGCTGGGGGATCCGAGGCGTCCCCCGCCAATGAGGTCAATGGGGCGACTGAGGCGGCGCCCGTTCCCCCGCCGGCGGAGCCCGAGCAGCCGGACGGCGCCGGCAAGTCAGACGAGCCCAGCCAGTCGGAGGCCGAGTCGGGCTCGCTGTCCAGCCCCAGCCTGGAGCTCTCGGAGAGCAGCGGCGCCTACCTGGACCAGCCCTCATCCTGTTACTCGGCCATGGGGGCGGACGGGCTCTCTGACTCAGTGTCCGCCAGCGCCGCCCTCGGGGACCAGGCCGCCGGCACTCCCGTCGCAGCAGCTGCCGCCCCGGACCACGACGCCATGCCCGCCTACTACTTTGTGAAGTGGATCAATTGGAAAGGCAAGACCACGCCCATCATCACCCAGAGCGAGAACGGGCCGTGCCCCTTACTGGCCATCATGAACATCCTCTTCCTGCGCTGGAAGgCCAAGTTACCTGCCCAGACCGAAGTGATCAACACAGAGGAGCTGATGGCACATCTGGGAGAATGCATTTTATCCATTAAACcaagagagaaaacagaaggACTGGAGCTGAATTTTCAACAGAACATGAGTGACGCCATGGCTGTCCTCCCCAAGCTTTCCACGGGCTTGGACGTCAACGTGCGCTTCACGGGTGTGTCGGACTTCGAGTACACCCCCGAGTGCATCGTCTTCGACCTGCTGGACATCCCCCTCTACCACGGCTGGCTGGTGGACCCCCAGAGCCTGGAGGTGGTGCAGGCCGTGGGCAAGCTGAGCTACAACCAGCTCGTGGAGAAGATCATCAACTACAAACACTCGTCTGACAGCAGCCAAGTCAGCGAAGggCTGGTGGCGGAGCAGTTCCTGGAGTCCACGGCCACCCAGCTGTCCTACCACGGGCTGTGTGAGCTCAGTACCACGGCCAAGGAGGGCGAGCTGTCAGTCTTCTTCCGGAACAACCACTTCAGCACCATGATCAAGCATAAGGACCACCTGTACCTGCTGGTGACGGACCAGGGCTTCCTGCAGGAGGAGGGCCTGGTGTGGGAGAGCCTGCACAACGTGGAAGGGGACGGCAACTTCTGCGACTCAGAGTTCCGCCTGTGCCACCCGCCCCAGAGGGTGGCGCCCGCTCCGCAGCCCAGCGCCGCGCCCAcgccccagcagcagcagcggcagaTTGACCAGGACTACCTGGTGGCGAtgtctctgcagcagcaggGCGTCTCCCCCCTCAGCGATTTGGAGCTGGCCAGGCAGCTGCAGCAGGAGGAgtaccagcagcagcaggaacagCAGCCCCAGCCCACGCCACCCACGCAGCAGGTGAGGGGCCAGGCGGCGGGCAGACAGGCCGGGGAGAGAAGACGCGCCGAGAAGAAGGAAGACTCGGACTGTGCCATATTGTAGCGTGCCTGCTaccacccccccgccccatgCAAACCTTGACCCCTGCCCCCAAAAGCTTTAGGAGTTGGCTCTGTGGcatggaggaagagagagatgaCCTACAGACGGAGAGGgaatgggggagagagagagagagagagggagggaagggtaGAGAGATGACCTACAGatggagagggaaggggggagagagatgaCCTACAGATGGAGAGGGAagtgggaagagagagagagagagagggagggaaggggagagagatgACCTATAGACAgtgagggaaggagagagagtgatCGGCCCCTCACTGGCAGGGGAGCCCACGGTGTCCTCCGTCCCCACAGTGCTGCCCCACAGTCCACTTGCCTTGCCTGGAAATGGGTCGAGTCGCAGTGACCTCCAATACCGATCTTTAAATCATCAGTCTTCAAGACGCGGCCAAAGAAAGGTTTCAATCCCCAGGTTCC

Function

NR:

description
PREDICTED: protein FAM63A

GO: NA

KEGG:

id description
K01309 MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012455 True 3606 mRNA 0.56 11 18469995 18476148

Neighbor

gene id symbol gene type direction distance location
AMCG00012450 psmb4 coding downstream 81766 18383678 ~ 18388229 (-)
AMCG00012449 NA coding downstream 143112 18323005 ~ 18326883 (-)
AMCG00012448 vps45,LOC106588336 coding downstream 149022 18295215 ~ 18320973 (-)
AMCG00012441 NA coding downstream 192391 18261865 ~ 18277604 (-)
AMCG00012443 NA coding downstream 218989 18240923 ~ 18251006 (-)
AMCG00012461 NA coding upstream 92701 18568849 ~ 18569085 (-)
AMCG00012463 NA coding upstream 119053 18595201 ~ 18601943 (-)
AMCG00012462 NA coding upstream 139765 18615913 ~ 18651892 (-)
AMCG00012469 NA coding upstream 463824 18939972 ~ 18954308 (-)
AMCG00012468 NA coding upstream 483668 18959816 ~ 18967559 (-)
G136906 NA non-coding downstream 27408 18439579 ~ 18442587 (-)
G136826 NA non-coding downstream 290308 18140751 ~ 18179687 (-)
G136820 NA non-coding downstream 357092 18112676 ~ 18112903 (-)
G136746 NA non-coding downstream 498142 17912238 ~ 17971853 (-)
G136750 NA non-coding downstream 506751 17941472 ~ 17963244 (-)
G136951 NA non-coding upstream 68770 18544918 ~ 18546313 (-)
G136955 NA non-coding upstream 76859 18553007 ~ 18556113 (-)
G136968 NA non-coding upstream 137891 18614039 ~ 18614257 (-)
G136997 NA non-coding upstream 310808 18786956 ~ 18787155 (-)
G137008 NA non-coding upstream 426325 18902473 ~ 18902838 (-)
G136900 NA other downstream 91698 18375330 ~ 18378297 (-)
G136837 NA other downstream 232739 18205375 ~ 18237256 (-)
AMCG00012437 LOC106580258 other downstream 367666 18098177 ~ 18102329 (-)
AMCG00012414 NA other downstream 690873 17767410 ~ 17779122 (-)
AMCG00012416 NA other downstream 705434 17757334 ~ 17764561 (-)
AMCG00012459 cdc42se1,LOC106569912,LOC106588345,LOC102790437 other upstream 40688 18516836 ~ 18537125 (-)
AMCG00012467 NA other upstream 451231 18927379 ~ 18933201 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other upstream 556455 19032603 ~ 19043449 (-)
G137199 NA other upstream 965779 19441927 ~ 19507394 (-)
G137246 NA other upstream 1238014 19714162 ~ 19793531 (-)

Expression


Co-expression Network