AMCG00012461


Basic Information

Item Value
gene id AMCG00012461
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 18568849 ~ 18569085 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012461
ATGGCGGAGGAGCTCCTGAGCAGCACCCTGTCTGCGTCGGGCGCAGCCCTCCccgtctcctcctccctcacccTGGAGCAGAAGGCCGCCTTCGTCTTCGTCTTCCTGCTCTTCATCTTCCTGGGCCTCCTCATCGTGCGCTGCTTCCGCATCCTGCTGGACCCCTACCGCAGTATGCCATCCTCCACCTGGACCGACTACATGGAGAAAGAGACCTTCGACTACCGCATCGCCTGA

Function

GO:

id name namespace
GO:0006816 calcium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012461 True 237 mRNA 0.63 1 18568849 18569085

Neighbor

gene id symbol gene type direction distance location
AMCG00012455 fam63a coding downstream 92701 18469995 ~ 18476148 (-)
AMCG00012450 psmb4 coding downstream 180620 18383678 ~ 18388229 (-)
AMCG00012449 NA coding downstream 241966 18323005 ~ 18326883 (-)
AMCG00012448 vps45,LOC106588336 coding downstream 247876 18295215 ~ 18320973 (-)
AMCG00012441 NA coding downstream 291245 18261865 ~ 18277604 (-)
AMCG00012463 NA coding upstream 26116 18595201 ~ 18601943 (-)
AMCG00012462 NA coding upstream 46828 18615913 ~ 18651892 (-)
AMCG00012469 NA coding upstream 370887 18939972 ~ 18954308 (-)
AMCG00012468 NA coding upstream 390731 18959816 ~ 18967559 (-)
AMCG00012473 NA coding upstream 450410 19019495 ~ 19026095 (-)
G136955 NA non-coding downstream 12736 18553007 ~ 18556113 (-)
G136951 NA non-coding downstream 22536 18544918 ~ 18546313 (-)
G136915 NA non-coding downstream 74944 18420009 ~ 18493905 (-)
G136906 NA non-coding downstream 126262 18439579 ~ 18442587 (-)
G136826 NA non-coding downstream 389162 18140751 ~ 18179687 (-)
G136968 NA non-coding upstream 44954 18614039 ~ 18614257 (-)
G136997 NA non-coding upstream 217871 18786956 ~ 18787155 (-)
G137008 NA non-coding upstream 333388 18902473 ~ 18902838 (-)
G137014 NA non-coding upstream 356460 18925545 ~ 18926343 (-)
G137094 NA non-coding upstream 610054 19179139 ~ 19181358 (-)
AMCG00012459 cdc42se1,LOC106569912,LOC106588345,LOC102790437 other downstream 31724 18516836 ~ 18537125 (-)
G136900 NA other downstream 190552 18375330 ~ 18378297 (-)
G136837 NA other downstream 331593 18205375 ~ 18237256 (-)
AMCG00012437 LOC106580258 other downstream 466520 18098177 ~ 18102329 (-)
AMCG00012414 NA other downstream 789727 17767410 ~ 17779122 (-)
AMCG00012467 NA other upstream 358294 18927379 ~ 18933201 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other upstream 463518 19032603 ~ 19043449 (-)
G137199 NA other upstream 872842 19441927 ~ 19507394 (-)
G137246 NA other upstream 1145077 19714162 ~ 19793531 (-)
AMCG00012503 NA other upstream 1334021 19903106 ~ 19910378 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_00453663_00453991 CTXN3 coding CI01000304 null 453663 ~ 455240 (+)