AMCG00012463


Basic Information

Item Value
gene id AMCG00012463
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 18595201 ~ 18601943 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012463
ATGCAGCGCACATCATCAAAGATGTGTCGAGATGCCAGCAGCGCACAGGGCACAATCCCGACAGCAGGTGGCAGCTTCAGCTGGAGCAATTTGAGCAACAACCCACATTTGAAAAGCGTCATCCTGAAGGAGAAGACGATCCTGCAGACAGTAAGCCGGGCACAGCACCCGTTCCTGGTGCACTTCTTCGCCAGCTTCCACACGAGGGACCGCGCGTTCTTCGTGCTGGATTTCGCTGCAGGGGGGGACCTGAGCTTCAAGTCCAATGGTGACCGGTTCCCGGAGCCCCGCGCAGTGTTCACTCTGGCCTGTGTGGTGCTGGGCGTGCAGTTCTTGCACTGCCGCAAGATTGCACACCGGGATTTGAAGTTGCAAAATCTTTTGATGGACTCCAGGGGCTACATCAAGATCACAGACTTCGGTCTGTGTAAGGAAGGGATGGGCTTCAGAGACCGGACCTGGACGCTGTGCGGCACCCCAGCGTTTTACGCTCCGGAGATGCTGAAGAAGCTGCCCTACACGAGGTCCGTCGACTGGTGGGCGCTGGGGGTCCTCGGGTTTCAGATGATGGTGGGCCAGCGTCCCTTCACTGGGAAGTGTAGGAAGCAGCTGTTCAGACACATCATTCACCAGGAAGTGAAGTATCCTGCCTTCCTGTCAGCTGAGGCCGTGTCCCTCCTGAGAAAGCTGCTGAGCAAAGACCCCAGGAGGCGCCTCGGGAACTGCAAGCGAGACGCGGAGGTGGTCAAGCTGCAGCCCTTCTTCAGAGATGTGGACTGGCGAGCTCTCCGTGCACAGACAGTGCCTGCTCCGGTCTTGCCCCCCGTCAGAGCTCCCGAGGTCTCCCAGACCCTCGCTGCCGACATCCTGACTCGGATCCCCAAGCGCCGGGTCGTCACCGCCCGGGAGCAGGAGCTCTTTAAGGACTTTGATTACATGGCAGATTTCTGCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012463 True 954 mRNA 0.59 9 18595201 18601943

Neighbor

gene id symbol gene type direction distance location
AMCG00012461 NA coding downstream 26116 18568849 ~ 18569085 (-)
AMCG00012455 fam63a coding downstream 119053 18469995 ~ 18476148 (-)
AMCG00012450 psmb4 coding downstream 206972 18383678 ~ 18388229 (-)
AMCG00012449 NA coding downstream 268318 18323005 ~ 18326883 (-)
AMCG00012448 vps45,LOC106588336 coding downstream 274228 18295215 ~ 18320973 (-)
AMCG00012462 NA coding upstream 13970 18615913 ~ 18651892 (-)
AMCG00012469 NA coding upstream 338029 18939972 ~ 18954308 (-)
AMCG00012468 NA coding upstream 357873 18959816 ~ 18967559 (-)
AMCG00012473 NA coding upstream 417552 19019495 ~ 19026095 (-)
AMCG00012475 NA coding upstream 514355 19116298 ~ 19120008 (-)
G136955 NA non-coding downstream 39088 18553007 ~ 18556113 (-)
G136951 NA non-coding downstream 48888 18544918 ~ 18546313 (-)
G136915 NA non-coding downstream 101296 18420009 ~ 18493905 (-)
G136906 NA non-coding downstream 152614 18439579 ~ 18442587 (-)
G136826 NA non-coding downstream 415514 18140751 ~ 18179687 (-)
G136968 NA non-coding upstream 12096 18614039 ~ 18614257 (-)
G136997 NA non-coding upstream 185013 18786956 ~ 18787155 (-)
G137008 NA non-coding upstream 300530 18902473 ~ 18902838 (-)
G137014 NA non-coding upstream 323602 18925545 ~ 18926343 (-)
G137094 NA non-coding upstream 577196 19179139 ~ 19181358 (-)
AMCG00012459 cdc42se1,LOC106569912,LOC106588345,LOC102790437 other downstream 58076 18516836 ~ 18537125 (-)
G136900 NA other downstream 216904 18375330 ~ 18378297 (-)
G136837 NA other downstream 357945 18205375 ~ 18237256 (-)
AMCG00012437 LOC106580258 other downstream 492872 18098177 ~ 18102329 (-)
AMCG00012414 NA other downstream 816079 17767410 ~ 17779122 (-)
AMCG00012467 NA other upstream 325436 18927379 ~ 18933201 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other upstream 430660 19032603 ~ 19043449 (-)
G137199 NA other upstream 839984 19441927 ~ 19507394 (-)
G137246 NA other upstream 1112219 19714162 ~ 19793531 (-)
AMCG00012503 NA other upstream 1301163 19903106 ~ 19910378 (-)

Expression


Co-expression Network