AMCG00012478


Basic Information

Item Value
gene id AMCG00012478
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19196597 ~ 19204742 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012478
ATGCCCATACTTAACCCGGTGCAGTCTTTCAGGTCTTtgctggaagaaaaacaactcaGCTCCTTTGTCAGGGTCTACAGAATGCTGTGCGGGAGTCTGCTGATCACGGTGCTGTGTGGAGTGGTGGCGGCTCATCTCCACCTAGATCCTGACCTTGACATTCACTGGGAGCTGTGGAAGAAAACCCATGGCAAGTCCTACAGGAGTCAGGTGGATGAGGGGGAGAGGCGTGTTCTTTGGGAGAAGAACCTCCGACTGATCTCCCAGCAGAACCTGGAGGCCTCGCTGGGCATGCACAGCTACGAGCTGGGCATGAACCACCTGGGAGACATGACCACTGAAGAGGTGTTAGCCATGCTGGCCGGCACTCGGGTCCGGCCGGGTATCCAGAGGGGCACCACCTCCTTTGTGCGTTCCTCTGGGGCCCCTGTCCCTGATGCCATCGACTGGAGAGACAAGGGCTGCGTGACTGAAGTGAAATACCAGGTGAGGCCAGGAGTGGAGAGGGCAAGACAGggtgCCTGTGGGTCCTGTTGGGCGTTCAGTGCTGCAGGTGCTCTGGAGGGCCAGCTGAAGCTGAAGACTGGCAAACTTGTGGACCTCAGCCCTCAGAACCTGGTGGACTGCTCCTCCAAATACGGCAACCTGGGCTGCAATGGTGGCTACATCGATGATGCGTTCCATTATGATGGACAGTGCCGGTATGATGTTGCCAATCGGGCCGCCAACTGCAGCAGCTACAGCAGCCTCCCTGAGGGTGATGAGAATGCCCTCAAAGAAGCCCTTGCCACCATTGGGCCTATCTCTGTAGTCATCGATGCCACCCGGCCCCAGTTCCTCTTGTACAAGAGTGGTGTTTATGATGACCCCTCCTGCACTCATAATCTGAACCACGCAGTGCTGGCAGTGGGATATGGGACTCTGGATGGAAAGGATTTCTGGCTGGTGAAGAACAGCTGGGGGAAAAGTTTCGGTGACCAAGGTTATATTCGAATGGTCCGGAACAAGGATGACCAGTGCGGGATCGCTCTGTATGCCTTCTACCCCAAGATGTAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012478 True 1056 mRNA 0.56 8 19196597 19204742

Neighbor

gene id symbol gene type direction distance location
AMCG00012475 NA coding downstream 76589 19116298 ~ 19120008 (-)
AMCG00012473 NA coding downstream 170502 19019495 ~ 19026095 (-)
AMCG00012468 NA coding downstream 229038 18959816 ~ 18967559 (-)
AMCG00012469 NA coding downstream 242289 18939972 ~ 18954308 (-)
AMCG00012462 NA coding downstream 544705 18615913 ~ 18651892 (-)
AMCG00012477 NA coding upstream 2607 19207349 ~ 19251412 (-)
AMCG00012482 NA coding upstream 95753 19300495 ~ 19323213 (-)
AMCG00012485 NA coding upstream 211205 19415947 ~ 19417276 (-)
AMCG00012490 LOC107577543,LOC107716568 coding upstream 305495 19510237 ~ 19517748 (-)
AMCG00012491 NA coding upstream 328738 19533480 ~ 19537105 (-)
G137094 NA non-coding downstream 15239 19179139 ~ 19181358 (-)
G137014 NA non-coding downstream 270254 18925545 ~ 18926343 (-)
G137008 NA non-coding downstream 293759 18902473 ~ 18902838 (-)
G136997 NA non-coding downstream 409442 18786956 ~ 18787155 (-)
G136968 NA non-coding downstream 582340 18614039 ~ 18614257 (-)
G137214 NA non-coding upstream 300142 19504884 ~ 19635067 (-)
G137232 NA non-coding upstream 412785 19617527 ~ 19622445 (-)
G137248 NA non-coding upstream 563386 19768128 ~ 19774086 (-)
G137270 NA non-coding upstream 695464 19900206 ~ 19900440 (-)
G137384 NA non-coding upstream 962333 20167075 ~ 20227959 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 153148 19032603 ~ 19043449 (-)
AMCG00012467 NA other downstream 263396 18927379 ~ 18933201 (-)
AMCG00012459 cdc42se1,LOC106569912,LOC106588345,LOC102790437 other downstream 659472 18516836 ~ 18537125 (-)
G136900 NA other downstream 818300 18375330 ~ 18378297 (-)
G136837 NA other downstream 959341 18205375 ~ 18237256 (-)
G137199 NA other upstream 237185 19441927 ~ 19507394 (-)
G137246 NA other upstream 509420 19714162 ~ 19793531 (-)
AMCG00012503 NA other upstream 698364 19903106 ~ 19910378 (-)
G137408 NA other upstream 1056260 20261002 ~ 20270864 (-)
G137608 NA other upstream 1830421 21035163 ~ 21038431 (-)

Expression


Co-expression Network