AMCG00012497


Basic Information

Item Value
gene id AMCG00012497
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19817519 ~ 19826263 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012497
GCCGAGACAAAGGGGTCATATACGGTTAAGGGTACTCTCTATTGTAATTTCTCGAAAACCATGTTATCAAATTGTCTATGTGATAAGGAGAGGGGAATTGTGGGTGATTTAGATTAGGTGGCCTTTGCTATAAGGGATATAAATTACCAAGAAAGGTGGTGTGTTGAGATTACATTGACGTGGAGTTATGGAGGTTGGGCTCCAAACTTATAAGGGGACCCACTgcaacagaaagagagagagggagcgtgagagagagaaggaacgAATCTCCCACTTGCCACTTCCCACTTAAGtAGGAACATACCTCCATCTCATCTCCTGAAAATGTCCAGCCCAGGCTACACCCCCAGTGGAATGGTTTTCACACAAAACCATACTGCTCCCACTGCCTTCGTGTCCAACCCCCCTTCTCACTTGAAGAAGTTCCTAAATGGGCAGCCCAAAATCCTTGGGTACCTCACCTCTGGGTCCCTCTGCATTAAAGCCGCCACACAGCCCAGCCGATCCCAGGGTAAGACTTTCGGCATCAAAGGAGTGTTGGTGGTGCTCTCCcttctgcagctctgtgtcTCCATCTTGGCCTCGGCCTTCGGCTGCAAAGCTGTCTGCAACAACTCTGAGCTTGTGGTGGAGTTTCAGAACTACAGTGTGACCAGTCCGCAATTTGGCACAAACCTGAACACCCAGCTCAGCCCAGCTCAGGGATACCAACCCAGCCCAGCTCAGGGATACCAACCCAGCCCAGCTCAGGGATACCAACCCAGCCCAGCTCCGGGATACCAACCCAGCCCAGCTCAGGGATGCCAGCACTGCACCTGCACAGTGCCCCCACAGGGGCAGAACCTCATGCTGCCAACAACCTTCAAGATTACTCTGGGGATTACTCTGCTCCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012497 True 900 mRNA 0.52 6 19817519 19826263

Neighbor

gene id symbol gene type direction distance location
AMCG00012495 NA coding upstream 29877 19763003 ~ 19787642 (+)
AMCG00012492 NA coding upstream 190150 19617738 ~ 19627369 (+)
AMCG00012493 bcan,LOC106569870 coding upstream 236080 19558654 ~ 19581439 (+)
AMCG00012486 NA coding upstream 275753 19537546 ~ 19541766 (+)
AMCG00012488 NA coding upstream 285711 19528472 ~ 19531808 (+)
AMCG00012496 NA coding downstream 25890 19852153 ~ 19856703 (+)
AMCG00012511 NA coding downstream 307059 20133322 ~ 20134653 (+)
AMCG00012513 shc1 coding downstream 400135 20226398 ~ 20234055 (+)
AMCG00012514 NA coding downstream 413571 20239834 ~ 20240031 (+)
AMCG00012517 NA coding downstream 456986 20283249 ~ 20291367 (+)
G137242 NA non-coding upstream 23987 19788987 ~ 19793532 (+)
G137196 NA non-coding upstream 127734 19659746 ~ 19689785 (+)
G137177 NA non-coding upstream 308321 19504883 ~ 19509198 (+)
G137155 NA non-coding upstream 391981 19423553 ~ 19425538 (+)
G137144 NA non-coding upstream 421766 19361344 ~ 19395753 (+)
G137332 NA non-coding downstream 339020 20165283 ~ 20228036 (+)
G137337 NA non-coding downstream 344163 20170426 ~ 20237873 (+)
G137348 NA non-coding downstream 375288 20201551 ~ 20201804 (+)
G137364 NA non-coding downstream 495343 20321606 ~ 20328824 (+)
G137494 NA non-coding downstream 707489 20533752 ~ 20533959 (+)
G137252 NA other upstream 1902 19814925 ~ 19815617 (+)
AMCG00012480 NA other upstream 467317 19332328 ~ 19350202 (+)
G137111 ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 other upstream 578561 19237689 ~ 19238958 (+)
G137083 NA other upstream 643098 19169748 ~ 19174421 (+)
AMCG00012471 NA other upstream 763690 19047497 ~ 19053829 (+)
G137265 txnip,LOC106943536,LOC106570200,LOC105012721 other downstream 64904 19891167 ~ 19895599 (+)
AMCG00012512 NA other downstream 420388 20246651 ~ 20270919 (+)
AMCG00012516 NA other downstream 504818 20331081 ~ 20344646 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other downstream 574746 20401009 ~ 20422556 (+)
AMCG00012521 NA other downstream 604662 20430925 ~ 20445287 (+)

Expression


Co-expression Network