AMCG00012501


Basic Information

Item Value
gene id AMCG00012501
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 19934859 ~ 19947563 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012501
GTGCGTCCCGTCGTCACCAGCAACGGCGCTGAAGAGCTTCCGGGTCAAAGGCAGCCGGAGGAGACAAGATGGCCGCCCCCTTGGAGCTGTATTGCTGGAAAGGCGACTGGGGTTTACCGTCTGTCGATGCAGAATGCCTCACCGTCCTGgcCTATGCCAAGTTTGCAGGCGCCCCCCTCAAAGTCCACAAGATCACAAACCCCTGGAGGAGCCCGACAGGGTCCCTGCCCGCCCTGAAGACCCAAGATGATGGGAACCTGAGCCAGCCACACAAGATCATCATCCATCTTCGCAAGCAGAAGTACAACCCTGACTATGACCTGTCAGCCAAGGAGGGGGCCGACACTCTGGCCTTCATCTCACTGCTAGAGGAGAGACTGCTGCCTGCACTGATCTACGCTGTGTGGGTCGACTCCAAGAACTATGTGGAGGTGACACGGCGCTGGCACGCCGAGAACATCCCCTTCCCACTCAATTTCTTCCTGCCCAACCGCATGCATGGCCGCCAGCTGGACAGGCTGAGGCTGGTGAGGGGAGACAGCGGCCTGGAGCCCGGGGACGAGATTGAGAAAGAGCTCTATCGAGACGCCCTGGAATGCATGACCCTGCTGTCCCAGCGACTCGGCTCACAAAAGTTCTTCTTCGGCGATTCGCCCTCCTCTCTGGACGCCTACGTGTTTGGACACCTGGCCCTGCTGCTCAAGGTGAAGCTGCCCAACAGTAAACTGCAGCAGCACCTGAAGTCCCTGGACAACCTGTGTCACTTCTGTACCAACATTCTGCAGCTCTACTTCCCCAACGAGGGAGCCGATGGCCCCTCCCGccgcccctccccctcctcctcctccccctcccaggCGGGGCCCAGCTCGGACGGCGGCGACTTTGAGCACGACCCACACAAACGCCGCAACCAGTTCCTGTCGGTGCTGGTGGCCCTCGGGGCCATGCTGAGCTACGCCCTGATGACCGGCATCGTGTCGGTGCACCGCGCACAGCCACAGGGGGCGCTGCAGGACGTGGATCAGCACCGGCTGTCACGCCACGAGGGGGAGGGAGACGAGGAGGACTGA

Function

GO:

id name namespace
GO:0006626 protein targeting to mitochondrion biological_process
GO:0005741 mitochondrial outer membrane cellular_component

KEGG:

id description
K17776 MTX; metaxin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012501 True 1073 mRNA 0.62 8 19934859 19947563

Neighbor

gene id symbol gene type direction distance location
AMCG00012502 NA coding downstream 3769 19915812 ~ 19931090 (-)
AMCG00012500 txnip,txnipa,LOC108410889,LOC107672857,LOC107738596,LOC107702541,LOC107731569 coding downstream 39091 19891143 ~ 19895768 (-)
AMCG00012498 ankrd34a,LOC106605449,LOC106580187 coding downstream 104704 19828500 ~ 19830155 (-)
AMCG00012499 NA coding downstream 121029 19803626 ~ 19813830 (-)
AMCG00012494 NA coding downstream 344595 19586764 ~ 19590264 (-)
AMCG00012505 NA coding upstream 79784 20027347 ~ 20033065 (-)
AMCG00012504 NA coding upstream 89372 20036935 ~ 20060267 (-)
AMCG00012506 NA coding upstream 155751 20103314 ~ 20107248 (-)
AMCG00012510 NA coding upstream 160599 20108162 ~ 20113136 (-)
AMCG00012509 NA coding upstream 166331 20113894 ~ 20118565 (-)
G137270 NA non-coding downstream 34419 19900206 ~ 19900440 (-)
G137248 NA non-coding downstream 160773 19768128 ~ 19774086 (-)
G137214 NA non-coding downstream 299792 19504884 ~ 19635067 (-)
G137232 NA non-coding downstream 312414 19617527 ~ 19622445 (-)
G137094 NA non-coding downstream 753501 19179139 ~ 19181358 (-)
G137384 NA non-coding upstream 219512 20167075 ~ 20227959 (-)
G137389 NA non-coding upstream 254001 20201564 ~ 20201895 (-)
G137390 NA non-coding upstream 262004 20209567 ~ 20212312 (-)
G137449 NA non-coding upstream 428880 20376443 ~ 20377953 (-)
G137472 NA non-coding upstream 475824 20423387 ~ 20423680 (-)
AMCG00012503 NA other downstream 24481 19903106 ~ 19910378 (-)
G137246 NA other downstream 141328 19714162 ~ 19793531 (-)
G137199 NA other downstream 427465 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 891410 19032603 ~ 19043449 (-)
AMCG00012467 NA other downstream 1001658 18927379 ~ 18933201 (-)
G137408 NA other upstream 313439 20261002 ~ 20270864 (-)
G137608 NA other upstream 1087600 21035163 ~ 21038431 (-)
AMCG00012541 NA other upstream 1092526 21040089 ~ 21042443 (-)
AMCG00012559 NA other upstream 1486101 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 1546664 21494227 ~ 21502199 (-)

Expression


Co-expression Network