AMCG00012505


Basic Information

Item Value
gene id AMCG00012505
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20027347 ~ 20033065 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012505
ATGCTGGagCACGACGACCCCAAGGTCACAAGCAGGAAGGCTGGGGGTCAGCAGGGGCACCGGGGGGGCGCAGGGGAGCTGGTGCCTAGGACCTGCAAGGACAGCGGCCAGGGAGGCGGTGGCAAAGCAATGGGGCACTGCCCTGGCACAGGGGGGCCCCCCAAAAAGAGCTGGTTCAGAATCATGATCCCCAAAGCGAAGAACTACGACAGGACGTGGCTGCTCTCTGCCCTGCAGGGCGTCTGCACGGTGCCCTTCACCCCTGTACAGtATCGCAACAGGGGCAGAAAGATTGTGTTCTATGTAGAGGGAGCCACCACAGCCAACGCGCTGGCCAAAGTGTCCGAGAGCTTCACCGACACCGAGGGGAACAAGGTGTCCATCATCATGAACCCCTCCCTCCCGCCCGCCTGCCTGGTGAACAAGCCCAGGCCCACAGTGCTTGAAGCCCAAATGCCAGCCGGAGCCCCGGCCTGCGAGgtcaGTCACTCTGTTGAGGAGATTAAGCGCGTCATTCTGCCCTTCCTGCACGAGTGA

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012505 True 537 mRNA 0.62 6 20027347 20033065

Neighbor

gene id symbol gene type direction distance location
AMCG00012501 NA coding downstream 79784 19934859 ~ 19947563 (-)
AMCG00012502 NA coding downstream 96257 19915812 ~ 19931090 (-)
AMCG00012500 txnip,txnipa,LOC108410889,LOC107672857,LOC107738596,LOC107702541,LOC107731569 coding downstream 131579 19891143 ~ 19895768 (-)
AMCG00012498 ankrd34a,LOC106605449,LOC106580187 coding downstream 197192 19828500 ~ 19830155 (-)
AMCG00012499 NA coding downstream 213517 19803626 ~ 19813830 (-)
AMCG00012504 NA coding upstream 3870 20036935 ~ 20060267 (-)
AMCG00012506 NA coding upstream 70249 20103314 ~ 20107248 (-)
AMCG00012510 NA coding upstream 75097 20108162 ~ 20113136 (-)
AMCG00012509 NA coding upstream 80829 20113894 ~ 20118565 (-)
AMCG00012508 paqr6,LOC107728479,LOC107688246 coding upstream 114712 20147777 ~ 20157212 (-)
G137270 NA non-coding downstream 126907 19900206 ~ 19900440 (-)
G137248 NA non-coding downstream 253261 19768128 ~ 19774086 (-)
G137214 NA non-coding downstream 392280 19504884 ~ 19635067 (-)
G137232 NA non-coding downstream 404902 19617527 ~ 19622445 (-)
G137094 NA non-coding downstream 845989 19179139 ~ 19181358 (-)
G137384 NA non-coding upstream 134010 20167075 ~ 20227959 (-)
G137389 NA non-coding upstream 168499 20201564 ~ 20201895 (-)
G137390 NA non-coding upstream 176502 20209567 ~ 20212312 (-)
G137449 NA non-coding upstream 343378 20376443 ~ 20377953 (-)
G137472 NA non-coding upstream 390322 20423387 ~ 20423680 (-)
AMCG00012503 NA other downstream 116969 19903106 ~ 19910378 (-)
G137246 NA other downstream 233816 19714162 ~ 19793531 (-)
G137199 NA other downstream 519953 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 983898 19032603 ~ 19043449 (-)
AMCG00012467 NA other downstream 1094146 18927379 ~ 18933201 (-)
G137408 NA other upstream 227937 20261002 ~ 20270864 (-)
G137608 NA other upstream 1002098 21035163 ~ 21038431 (-)
AMCG00012541 NA other upstream 1007024 21040089 ~ 21042443 (-)
AMCG00012559 NA other upstream 1400599 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 1461162 21494227 ~ 21502199 (-)

Expression


Co-expression Network