AMCG00012510


Basic Information

Item Value
gene id AMCG00012510
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20108162 ~ 20113136 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012510
ATGTCTCCCCAGGGCATCCCCAGCCTCGCGGTGGAACCTCTGCCCAGGGAGGCGGTGGCGATGGTGGTGGGCGCCCCGGAACAGCAGTGGAGGCCGGGCGGGGAGCAGCTGgaggaggggggcagggaggcGGTCCAGCTGCGGCAGGAGCTGAGCCTCAGGGACAGGCAGTGCGAGACGCTCGCCGGGGAGGCCGAGGCCCTGCGCAGCCGACTGAGGCGGAACAGTGAGATTCTGAGGGCCCTGCTGGGGAGGCAGGGTGGGGGCAGGGAGGAGGcggtggtggtggaggaggcggcccgcagagaggaggaggaagagaaggtGATGCTGGGCAGGGTGGCAAGGCTCCTGCGGGGGAGGAGTGCGAGCGAGGGAGGCCAATGGAGGGTGGTGGGAgcggacgaggaggaggaggagaagaggaaggacGGGGAtttgaagaggaggaggaaacaAGAGGGGGTGCAGAGTGTCGGCGTTGAGCACATGCGGGAACAGCTGGAGGCAGCGCGGAGGCTGGCGGAGGCACTAGAGGGGAAGGCCAGCGCAGAGAGGAGGGTGTCGGAGATCGAGGGCCACCTGGACAACATGAGGGCTGTGCTGGCCCAGTATGAGATGCGCAAGAGGAGACAGAGCTCAGCCATGGCGGACATGGAGGGACAGGTGGAGGAGACaagggggacagggagaggggacAAGGGGacaggagagaagggagagggaaACAAGTGCACCCAAGGGAATGAGTCTCTGAGGCTGAGGCTGCAGGAGGTGGAGCAGAGGCTGGAGGTGGTGAGGCAGCAAACCAAGGGCAGCGTGCCAGGGGTAGAGCTGTGGAGGGGCAGGGAGGCCTTGGGTGGCACCATCGCCGAGCTGAAGCAGCTGCTGGGGGAGggGCGCCTGCAGTCGGATTTCGTACCCCTGGAGGACCATGAGCGGTGCCGGGCATCCTGGCAGGAGAGCGTGAGGGAGCTGGAGCGCCTGGTCCTGCAGCTGACCGCCCAGAACCAGAACCTGCGGGGGCAGCTGTGCCCACTAGATCGGCCAGGCGAGCGGCAGGGGCCGAGGCAGGGGTCAAGGCAGCGGCCACCCATCAGCAGTAGGGGCTCTCGGCCCGTGTCGGTGGGGGACTTTACGGGGGAGGGAGGGGCAGTGGTGGGGAGCAGCGGCTCTGCCCAGATGAGACCCTGGAAGTCTGAGAAGGTGCTGTCGGGCGGCCAAGGGGAGCAAGGGGGACCAGGGGCAGAGCGGCAGTCAGCCGGGGGCAGGTGGGAATCAGAGCCGGATGTCATGGATTCGCTGCTGGAATTCCTCCAGGGGGCGACTGTGCACCCTAAATTTTCCCCCCAGTCTGGCCCTCCCGTTCCCATCCTTTCtgccagccctggtcctgggttGTCCTGGAGGCGCATGGGCCGTATATTCCAGACGATGTCCCCCAGGGTGTCCCCCCCTGCCCCTGGTACTGTCCAGCAGGGGAAGGAAGCACCCGCCTGCGTCTCGGTCTCCGGGGTGGTCCTCCAAGAGAGGaagctggccaggagggagaaGAAGGAAGAGGACGAGGGAAGGGGGGATGGAGACAAGACAGAGAGGATGAAACGGGAGCTGCGGCGCCTGGAGGATGACCTGAGCAGGGAGAAGGAGGTGTCCAGAAATCTCCAAGCCCAGCTGGAGATCCAGGAGGCCGAGATCCGAACCTTGGGGGACTATTTCCCACCTGACATCCTGTGGGAGGAGGCAGAAGAAGCGGGGGTTGGTGGCGGAGGGCCGGATGAGGTGGACAGGGGGCGGAAGGGAGCATTCGAGTGTCCAGCGATGAAAGAACTGTTGCAGAAGGTGGCAAGCCTATCCCTGAGGTACCAGCAGGCCCAGACCACATTGAGGACTCAATTAGAGGAGCTCCCAGAGGCCAGGCAGCGCATCCGGGCGCTGGAGGAACGTCTGGGGGAGCTGGGACAGGAGACAGTGAGCCGGGAGGAGCACCAGCGGACAGTATTGGGGCTGGAGAGTAAGGTGGCGGTTCTGCGCATTGAGGTGGAAAGGATGGAGGAGGACCTGGGCCAGAGGCGGGCGGAGGTGGAGCGTCTGCAGGCCGAGGTGGACCGGGCCTGCGGTGAGGTGCACAACCTGGAGGCTCGGGAGGATCGACGACTGGATGAGGCCCGAGCGGAGGCAGACAGGGAGGCCAAGGCCCTGCGTGGGGAAGTGGGCCGGCTGTTTGCCCAGTGCCAGGCTGCCCAGCATGAGGTGGAGGATGAGCGGAGGGGGGGCGCCAAGTTGAGCCAGCAAGTGACAGATCTGGAGGCGAGGCTTGCCAACCGGGAGAGCGAAGCCTGGGGGCTGAGAGAGAGCCTAAGGCAGCTGCAGGAGAGGGCAGACCGGCTCGAGGACTCCGGACGGGACAAGGACCACATGGGCACGATGGATGACGAGGTGCACAGCATGCTTCTGCACATCTACAGCATGCAGAGACAGGCGGTATGCTGA

Function

GO: NA

KEGG:

id description
ko00513 Various types of N-glycan biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012510 True 2493 mRNA 0.66 6 20108162 20113136

Neighbor

gene id symbol gene type direction distance location
AMCG00012506 NA coding downstream 914 20103314 ~ 20107248 (-)
AMCG00012504 NA coding downstream 47895 20036935 ~ 20060267 (-)
AMCG00012505 NA coding downstream 75097 20027347 ~ 20033065 (-)
AMCG00012501 NA coding downstream 160599 19934859 ~ 19947563 (-)
AMCG00012502 NA coding downstream 177072 19915812 ~ 19931090 (-)
AMCG00012509 NA coding upstream 758 20113894 ~ 20118565 (-)
AMCG00012508 paqr6,LOC107728479,LOC107688246 coding upstream 34641 20147777 ~ 20157212 (-)
AMCG00012507 smg5 coding upstream 55019 20168155 ~ 20178964 (-)
AMCG00012520 NA coding upstream 179594 20292730 ~ 20297061 (-)
AMCG00012524 NA coding upstream 590293 20703429 ~ 20742998 (-)
G137270 NA non-coding downstream 207722 19900206 ~ 19900440 (-)
G137248 NA non-coding downstream 334076 19768128 ~ 19774086 (-)
G137214 NA non-coding downstream 473095 19504884 ~ 19635067 (-)
G137232 NA non-coding downstream 485717 19617527 ~ 19622445 (-)
G137094 NA non-coding downstream 926804 19179139 ~ 19181358 (-)
G137384 NA non-coding upstream 53939 20167075 ~ 20227959 (-)
G137389 NA non-coding upstream 88428 20201564 ~ 20201895 (-)
G137390 NA non-coding upstream 96431 20209567 ~ 20212312 (-)
G137449 NA non-coding upstream 263307 20376443 ~ 20377953 (-)
G137472 NA non-coding upstream 310251 20423387 ~ 20423680 (-)
AMCG00012503 NA other downstream 197784 19903106 ~ 19910378 (-)
G137246 NA other downstream 314631 19714162 ~ 19793531 (-)
G137199 NA other downstream 600768 19441927 ~ 19507394 (-)
AMCG00012472 ensa,LOC102787866,LOC100695493,LOC101487776,LOC102291346,LOC102199757,LOC108243249,LOC103369031 other downstream 1064713 19032603 ~ 19043449 (-)
AMCG00012467 NA other downstream 1174961 18927379 ~ 18933201 (-)
G137408 NA other upstream 147866 20261002 ~ 20270864 (-)
G137608 NA other upstream 922027 21035163 ~ 21038431 (-)
AMCG00012541 NA other upstream 926953 21040089 ~ 21042443 (-)
AMCG00012559 NA other upstream 1320528 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 1381091 21494227 ~ 21502199 (-)

Expression


Co-expression Network