AMCG00012511


Basic Information

Item Value
gene id AMCG00012511
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20133322 ~ 20134653 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012511
ATGGGCTTGGCTGTCCACAAGATGGCCAGGCAGGACCACTTGTCCACCCTGCACCACCTGAACACAACTCTGAGTGCCTGCCAGAGCTCCCCTACCTGCAACCTCTCCGAGATGGGCTACCACCACTATGACACCCTGGAGGAGGTGGGGCTGCCGGGCGACGGGACGCCCCTGCTGCGCTCGGGCGTGTCCATTGTCTACTTCCTGGTGTGCGCGGCTGGTCTTCTGGGCAATCTGCTAGTGCTGGTGCTACTGCGGCCTTGGCGGGGGGGCGCCGCCAAGTCCCCCATCGACTTCTTCGTCTTCAACCTAGCGCTCACAGACCTGCAGTTCTGCATGGTGGTGCCTTTTTGGGCAGTCGAGGTTGCACTGGACTTCCGCTGGCCCTTCGGTCACGTCATGTGCAAGCTGGTGTCCCTGACCACCGTGGTCAACATGTATGCCAGCGTCTTCTTCCTCACCGCCATGAGCATCACCCGCTACTGCTCCGTGGCCACTGCCCTCCAGTCGTCACCCCCCAGGGTGCGGGGTGCCTGCGGAGTCAAGCTGGCCACCGCCCTCATCTGGTCGGCCGCCTGGCTGGCCGGCACGCCCAATATCGTCTACTCCACTCTGGCCGATGTGGGTGGGGATGCAGTCTGCCTGCTGCGTTTCCCCCACGGAAACTTCTGGTTGGGCATGTACCACCTGCAGAAGATCATCCTGGGCTTCCTGCTGCCCTACTGTGTGATACTGGTCTCCTACCTCCTGCTGCTGCACTTCCTGTCCCAGCACAATCTCAGCGGCCTCAACCCCCGGCGGCAGAGCCGTGTGTCCAGGTCGGTTGCTGTGGTTGTGCTGGCCTTCTTCCTGTGCTGGCTGCCCAACCAGGCCATGACGCTGTGGGGGGTGCTGATCAAGCTGGACGTGGTGGACTTCGACATGGCCTACTACACGGCCCAGACCTTTGTGTTCCCTGTCACCGCCTGCCTGGCACACACCAACAGCTGCCTGAACCCTGTCATCTACTGCCTGATGCGCCGCGACTTCAGGGAGGCCCTCAAGGCAATACTGAGGTCCTGGGTGTGCAGGGGCAGGGCCCtgggggctgggggtggggtCAGAGGGAAGGGGCGGAGGGAGGGGCAGTTTGCTGTCTCCTCTTGGCCCAAGTCATGCCTGGCTGGCCTAAGCTGGAGCCGCAACCCCCCCTGCTCCAACAGCGAGCCCCCCCTGGACAGTCACAGGGCTATTCCCCTCAATAATATGGATTCCTCCACCAAGAGATACACCCTGCCATCCACCACCATCATCCCCCTGCAGAGGCAATCCCAAGAGCCCCTGAATGACTAG

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012511 True 1332 mRNA 0.63 1 20133322 20134653

Neighbor

gene id symbol gene type direction distance location
AMCG00012496 NA coding upstream 276619 19852153 ~ 19856703 (+)
AMCG00012497 NA coding upstream 307059 19817519 ~ 19826263 (+)
AMCG00012495 NA coding upstream 345680 19763003 ~ 19787642 (+)
AMCG00012492 NA coding upstream 505953 19617738 ~ 19627369 (+)
AMCG00012493 bcan,LOC106569870 coding upstream 551883 19558654 ~ 19581439 (+)
AMCG00012513 shc1 coding downstream 91745 20226398 ~ 20234055 (+)
AMCG00012514 NA coding downstream 105181 20239834 ~ 20240031 (+)
AMCG00012517 NA coding downstream 148596 20283249 ~ 20291367 (+)
AMCG00012518 LOC107669979 coding downstream 166173 20300826 ~ 20327286 (+)
AMCG00012515 NA coding downstream 213954 20348607 ~ 20353279 (+)
G137242 NA non-coding upstream 339790 19788987 ~ 19793532 (+)
G137196 NA non-coding upstream 443537 19659746 ~ 19689785 (+)
G137177 NA non-coding upstream 624124 19504883 ~ 19509198 (+)
G137155 NA non-coding upstream 707784 19423553 ~ 19425538 (+)
G137144 NA non-coding upstream 737569 19361344 ~ 19395753 (+)
G137332 NA non-coding downstream 30630 20165283 ~ 20228036 (+)
G137337 NA non-coding downstream 35773 20170426 ~ 20237873 (+)
G137348 NA non-coding downstream 66898 20201551 ~ 20201804 (+)
G137364 NA non-coding downstream 186953 20321606 ~ 20328824 (+)
G137494 NA non-coding downstream 399099 20533752 ~ 20533959 (+)
G137265 txnip,LOC106943536,LOC106570200,LOC105012721 other upstream 237723 19891167 ~ 19895599 (+)
G137252 NA other upstream 317705 19814925 ~ 19815617 (+)
AMCG00012480 NA other upstream 783120 19332328 ~ 19350202 (+)
G137111 ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 other upstream 894364 19237689 ~ 19238958 (+)
G137083 NA other upstream 958901 19169748 ~ 19174421 (+)
AMCG00012512 NA other downstream 111998 20246651 ~ 20270919 (+)
AMCG00012516 NA other downstream 196428 20331081 ~ 20344646 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other downstream 266356 20401009 ~ 20422556 (+)
AMCG00012521 NA other downstream 296272 20430925 ~ 20445287 (+)
AMCG00012523 NA other downstream 346461 20481114 ~ 20493787 (+)

Expression


Co-expression Network