Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012514 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 20239834 ~ 20240031 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012514 | True | 198 | mRNA | 0.61 | 1 | 20239834 | 20240031 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012513 | shc1 | coding | upstream | 5779 | 20226398 ~ 20234055 (+) |
| AMCG00012511 | NA | coding | upstream | 105181 | 20133322 ~ 20134653 (+) |
| AMCG00012496 | NA | coding | upstream | 383131 | 19852153 ~ 19856703 (+) |
| AMCG00012497 | NA | coding | upstream | 413571 | 19817519 ~ 19826263 (+) |
| AMCG00012495 | NA | coding | upstream | 452192 | 19763003 ~ 19787642 (+) |
| AMCG00012517 | NA | coding | downstream | 43218 | 20283249 ~ 20291367 (+) |
| AMCG00012518 | LOC107669979 | coding | downstream | 60795 | 20300826 ~ 20327286 (+) |
| AMCG00012515 | NA | coding | downstream | 108576 | 20348607 ~ 20353279 (+) |
| AMCG00012519 | NA | coding | downstream | 132649 | 20372680 ~ 20385756 (+) |
| AMCG00012525 | NA | coding | downstream | 544588 | 20784619 ~ 20788119 (+) |
| G137337 | NA | non-coding | upstream | 1961 | 20170426 ~ 20237873 (+) |
| G137332 | NA | non-coding | upstream | 11798 | 20165283 ~ 20228036 (+) |
| G137348 | NA | non-coding | upstream | 38030 | 20201551 ~ 20201804 (+) |
| G137242 | NA | non-coding | upstream | 446302 | 19788987 ~ 19793532 (+) |
| G137196 | NA | non-coding | upstream | 550049 | 19659746 ~ 19689785 (+) |
| G137364 | NA | non-coding | downstream | 81575 | 20321606 ~ 20328824 (+) |
| G137494 | NA | non-coding | downstream | 293721 | 20533752 ~ 20533959 (+) |
| G137539 | NA | non-coding | downstream | 516999 | 20757030 ~ 20757264 (+) |
| G137634 | NA | non-coding | downstream | 980168 | 21220199 ~ 21221044 (+) |
| G137631 | LOC107575789 | non-coding | downstream | 991949 | 21231980 ~ 21267912 (+) |
| G137265 | txnip,LOC106943536,LOC106570200,LOC105012721 | other | upstream | 344235 | 19891167 ~ 19895599 (+) |
| G137252 | NA | other | upstream | 424217 | 19814925 ~ 19815617 (+) |
| AMCG00012480 | NA | other | upstream | 889632 | 19332328 ~ 19350202 (+) |
| G137111 | ctsk,LOC107689854,LOC107587836,LOC107741754,LOC108441922 | other | upstream | 1000876 | 19237689 ~ 19238958 (+) |
| G137083 | NA | other | upstream | 1065413 | 19169748 ~ 19174421 (+) |
| AMCG00012512 | NA | other | downstream | 6620 | 20246651 ~ 20270919 (+) |
| AMCG00012516 | NA | other | downstream | 91050 | 20331081 ~ 20344646 (+) |
| AMCG00012522 | atp8b2,LOC107677029,LOC107714674 | other | downstream | 160978 | 20401009 ~ 20422556 (+) |
| AMCG00012521 | NA | other | downstream | 190894 | 20430925 ~ 20445287 (+) |
| AMCG00012523 | NA | other | downstream | 241083 | 20481114 ~ 20493787 (+) |
