AMCG00012525


Basic Information

Item Value
gene id AMCG00012525
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20784619 ~ 20788119 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012525
ATGCTCGAGCAGACGCGTCCAGACCGGGAAGATCGTTGTGTCACAGAGAACCAGTGCAGTGTGGACCGGAAAGCCTATCCCATGCAGCAGACAGCAGAGCCGGCGGTGCCCAgacaccaccccaccccccaggaCGAGGGCTGCATGCTCTGTGGCCTGCTGAATAGAAGACGGAGAAGTCTGAGCTGCGGTCACTATTACTGCGGCCCCTGCACGAGGAGGATAGTAGATGCCGGCTTCCAGGATATAGAGGGACTGGACTGTAAGCCTTGCCCTGAATGTAAGAGCAATGGCCTGTGAGACGGGATTTACAGATTTATTGTAAACcaatgtgaacattttaaaattctgttattaaagataataacaataaaa

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012525 True 375 mRNA 0.51 2 20784619 20788119

Neighbor

gene id symbol gene type direction distance location
AMCG00012519 NA coding upstream 398863 20372680 ~ 20385756 (+)
AMCG00012515 NA coding upstream 431340 20348607 ~ 20353279 (+)
AMCG00012518 LOC107669979 coding upstream 457333 20300826 ~ 20327286 (+)
AMCG00012517 NA coding upstream 493252 20283249 ~ 20291367 (+)
AMCG00012514 NA coding upstream 544588 20239834 ~ 20240031 (+)
AMCG00012532 NA coding downstream 31131 20819250 ~ 20829362 (+)
AMCG00012536 NA coding downstream 45752 20833871 ~ 20839466 (+)
AMCG00012530 NA coding downstream 55685 20843804 ~ 20847235 (+)
AMCG00012534 NA coding downstream 117937 20906056 ~ 20916631 (+)
AMCG00012531 NA coding downstream 131588 20919707 ~ 20921908 (+)
G137539 NA non-coding upstream 27355 20757030 ~ 20757264 (+)
G137494 NA non-coding upstream 250660 20533752 ~ 20533959 (+)
G137364 NA non-coding upstream 455795 20321606 ~ 20328824 (+)
G137337 NA non-coding upstream 546746 20170426 ~ 20237873 (+)
G137332 NA non-coding upstream 556583 20165283 ~ 20228036 (+)
G137634 NA non-coding downstream 432080 21220199 ~ 21221044 (+)
G137631 LOC107575789 non-coding downstream 443861 21231980 ~ 21267912 (+)
G137645 NA non-coding downstream 520099 21308218 ~ 21309033 (+)
G137669 NA non-coding downstream 813880 21601999 ~ 21602314 (+)
G137749 NA non-coding downstream 991947 21780066 ~ 21786045 (+)
AMCG00012523 NA other upstream 290832 20481114 ~ 20493787 (+)
AMCG00012521 NA other upstream 339332 20430925 ~ 20445287 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other upstream 362063 20401009 ~ 20422556 (+)
AMCG00012516 NA other upstream 439973 20331081 ~ 20344646 (+)
AMCG00012512 NA other upstream 513700 20246651 ~ 20270919 (+)
AMCG00012539 otud7b,LOC106581836 other downstream 204371 20992490 ~ 21039749 (+)
G137583 NA other downstream 268576 21056695 ~ 21059263 (+)
G137633 NA other downstream 425478 21213597 ~ 21219163 (+)
G137636 NA other downstream 436622 21224741 ~ 21230836 (+)
AMCG00012546 NA other downstream 457544 21245663 ~ 21253003 (+)

Expression


Co-expression Network