AMCG00012532


Basic Information

Item Value
gene id AMCG00012532
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 20819250 ~ 20829362 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012532
GCCCACGACAACTCTTTGGACTTTGAAAATATCATAGCTGTGGCAGAAAGAGGTCAAGGGCCAGCCAACAATGTTTTGCTCACGCTAGCCAATCCTGACAGGCTGGGAAGCCCCATTGTGGGCAGCCTATCAGTGTACTCCACCCAATCCTCAGCCATGAAGTTCTCCCTGTTCGCCGCCTTTGTTGTCGTATTGGCTCTGACACATGGCAGTGATGCCTCCTACCTGAGGGATGAGCCCGCCAAGACAGACCTGGAAACTCTGACCAAGTACTTCCAGGATCTGTCTGCCCTGATTTCCAGCACCACCCAGGATATTGTGGACAAACCCCTGGCTGACAACCTCCAGGCCCAACTAAAGCCCCTCGTGGACAACCTGGAGGAGCAGCTCAAACCCATGGCTGACAACCTGCAGGCCCAGGTGAAGCCCGTGACAGACAACCTGCAGGCCCAGCTCGTTGACTTCTGGCAGAAGATCCTGGACCAGGCCAAGGCTCTGGCTCCCCCCCAAGCAGTGGTGCCACTTGCCATGTCATCTACCCTGGCCAATGTGTGGGTAGCTGAAGCCCTGCAGTGTGAGGCTGTCCCTGGTGTCCTGAAGCAGATTGATGCTGGTGCTGGCAGAGTGTGTGGCATCTTGAAAGAGGGCAAAGTCGTGGAGTTCCGTGATGGCCATTGGGTTGAGCTAGAGGCATCTGGTAAACATGTCAGTGTAGGGCCTGCTGGGCTCTGGAGGGTGGGTGTTGATGGCCTGGTCTTCAAGTGGTTTAGAAGCGGCTGGGTCCAGGTGAATCCAGGCAACCTGATCCAGATTGATGCTGGTGGGGACAAGTTTGTGGTGGGCTGCAATGCCTCCCACAGTATCTTCTGTCTGAACCACAGGCCTGCACTGAGCTATGATGGTACTGGCAGTGTGTCCTGGATGGCAGTCCCAGGCAAGCTCAAGTACTACTCCTGTGGGCCTGTTGGGTGCTGGGGAGTGAACCAGCTAGATGAAATCCACGTCAAGCTGGGTGTCAGTGGGAATTCCTGTCATGGCCCTGAGAAGTGGTACCGCATTCCAGGCTCCCTGTCCATGGTGGAAGTGAGTGTGGATGGTGAAGTGCATGGAGTGAACAAACATGGCTGGGTATACAAAAGGATTGGTGTCAGTGCCTGTAACCCCTTTGGCAGTGGGTGGGAACATCTAAGGGTAGCTGGACTAAGCAGCCATGTGTCGTATGATCGTGGAGCCCTGTGGATTATCTGCAGAAATGGTGACCTCCTGGCTGACAACCAACAGGCCCAACTGAAGCCGCTGGTGGACAACCTGGAGCAGCAGCTCAATCCCACGACGGACAACCTGCAGGCCCAGGTGAAGCCCGTGGCAGACAACCTGCAGGCCCAACTCGTTGACTTCTGGCAGAAGATCCTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012532 True 1416 mRNA 0.56 9 20819250 20829362

Neighbor

gene id symbol gene type direction distance location
AMCG00012525 NA coding upstream 31131 20784619 ~ 20788119 (+)
AMCG00012519 NA coding upstream 433494 20372680 ~ 20385756 (+)
AMCG00012515 NA coding upstream 465971 20348607 ~ 20353279 (+)
AMCG00012518 LOC107669979 coding upstream 491964 20300826 ~ 20327286 (+)
AMCG00012517 NA coding upstream 527883 20283249 ~ 20291367 (+)
AMCG00012536 NA coding downstream 4509 20833871 ~ 20839466 (+)
AMCG00012530 NA coding downstream 14442 20843804 ~ 20847235 (+)
AMCG00012534 NA coding downstream 76694 20906056 ~ 20916631 (+)
AMCG00012531 NA coding downstream 90345 20919707 ~ 20921908 (+)
AMCG00012535 lix1l,LOC106570188,LOC106588578 coding downstream 95104 20924466 ~ 20930384 (+)
G137539 NA non-coding upstream 61986 20757030 ~ 20757264 (+)
G137494 NA non-coding upstream 285291 20533752 ~ 20533959 (+)
G137364 NA non-coding upstream 490426 20321606 ~ 20328824 (+)
G137337 NA non-coding upstream 581377 20170426 ~ 20237873 (+)
G137634 NA non-coding downstream 390837 21220199 ~ 21221044 (+)
G137631 LOC107575789 non-coding downstream 402618 21231980 ~ 21267912 (+)
G137645 NA non-coding downstream 478856 21308218 ~ 21309033 (+)
G137669 NA non-coding downstream 772637 21601999 ~ 21602314 (+)
G137749 NA non-coding downstream 950704 21780066 ~ 21786045 (+)
AMCG00012523 NA other upstream 325463 20481114 ~ 20493787 (+)
AMCG00012521 NA other upstream 373963 20430925 ~ 20445287 (+)
AMCG00012522 atp8b2,LOC107677029,LOC107714674 other upstream 396694 20401009 ~ 20422556 (+)
AMCG00012516 NA other upstream 474604 20331081 ~ 20344646 (+)
AMCG00012512 NA other upstream 548331 20246651 ~ 20270919 (+)
AMCG00012539 otud7b,LOC106581836 other downstream 163128 20992490 ~ 21039749 (+)
G137583 NA other downstream 227333 21056695 ~ 21059263 (+)
G137633 NA other downstream 384235 21213597 ~ 21219163 (+)
G137636 NA other downstream 395379 21224741 ~ 21230836 (+)
AMCG00012546 NA other downstream 416301 21245663 ~ 21253003 (+)

Expression


Co-expression Network