Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012536 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 20833871 ~ 20839466 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012536 | True | 360 | mRNA | 0.56 | 2 | 20833871 | 20839466 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012532 | NA | coding | upstream | 4509 | 20819250 ~ 20829362 (+) |
| AMCG00012525 | NA | coding | upstream | 45752 | 20784619 ~ 20788119 (+) |
| AMCG00012519 | NA | coding | upstream | 448115 | 20372680 ~ 20385756 (+) |
| AMCG00012515 | NA | coding | upstream | 480592 | 20348607 ~ 20353279 (+) |
| AMCG00012518 | LOC107669979 | coding | upstream | 506585 | 20300826 ~ 20327286 (+) |
| AMCG00012530 | NA | coding | downstream | 4338 | 20843804 ~ 20847235 (+) |
| AMCG00012534 | NA | coding | downstream | 66590 | 20906056 ~ 20916631 (+) |
| AMCG00012531 | NA | coding | downstream | 80241 | 20919707 ~ 20921908 (+) |
| AMCG00012535 | lix1l,LOC106570188,LOC106588578 | coding | downstream | 85000 | 20924466 ~ 20930384 (+) |
| AMCG00012529 | lix1l,LOC106588578,LOC106570188 | coding | downstream | 101514 | 20940980 ~ 20950454 (+) |
| G137539 | NA | non-coding | upstream | 76607 | 20757030 ~ 20757264 (+) |
| G137494 | NA | non-coding | upstream | 299912 | 20533752 ~ 20533959 (+) |
| G137364 | NA | non-coding | upstream | 505047 | 20321606 ~ 20328824 (+) |
| G137337 | NA | non-coding | upstream | 595998 | 20170426 ~ 20237873 (+) |
| G137634 | NA | non-coding | downstream | 380733 | 21220199 ~ 21221044 (+) |
| G137631 | LOC107575789 | non-coding | downstream | 392514 | 21231980 ~ 21267912 (+) |
| G137645 | NA | non-coding | downstream | 468752 | 21308218 ~ 21309033 (+) |
| G137669 | NA | non-coding | downstream | 762533 | 21601999 ~ 21602314 (+) |
| G137749 | NA | non-coding | downstream | 940600 | 21780066 ~ 21786045 (+) |
| AMCG00012523 | NA | other | upstream | 340084 | 20481114 ~ 20493787 (+) |
| AMCG00012521 | NA | other | upstream | 388584 | 20430925 ~ 20445287 (+) |
| AMCG00012522 | atp8b2,LOC107677029,LOC107714674 | other | upstream | 411315 | 20401009 ~ 20422556 (+) |
| AMCG00012516 | NA | other | upstream | 489225 | 20331081 ~ 20344646 (+) |
| AMCG00012512 | NA | other | upstream | 562952 | 20246651 ~ 20270919 (+) |
| AMCG00012539 | otud7b,LOC106581836 | other | downstream | 153024 | 20992490 ~ 21039749 (+) |
| G137583 | NA | other | downstream | 217229 | 21056695 ~ 21059263 (+) |
| G137633 | NA | other | downstream | 374131 | 21213597 ~ 21219163 (+) |
| G137636 | NA | other | downstream | 385275 | 21224741 ~ 21230836 (+) |
| AMCG00012546 | NA | other | downstream | 406197 | 21245663 ~ 21253003 (+) |
