AMCG00012547


Basic Information

Item Value
gene id AMCG00012547
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21224741 ~ 21230841 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012547
GGTTGTCCAGATCATGATTGGACTGTTTAATGTAGGCTCTGGAGTTCTTGTGGAAAGAGAAATGGACAGCATAGGGTTTCACATCGGGCTCCCATTTTGGCCATCACTGATATACATCATCTCGGGGGCTCTGAGTATTGCGGGGGAGAAGCAGAAGAAGACTGCTTGTCTGCCTGTGATTGTCATCCAGTATGGGGCCAGCCCTCAGCCAGCAACACAGCCTAGCAGCGCGCCGTCCCACCAGCCAGTGCCGGACAGAGAGTGGTCTTCACAACCTCACCCCTCCGCAGGACACAGAGTGACAGAGCCATAGGCTGATTATGGAgggtgaggtgggggggttgtgagCGAGAGACGGGACCACTGAGACATTGAAAGTACACTAGAGACACTACCTGGATGACTGCTTTTCTGTAGTTTCTTCTCAATGTCTGCTCATCTGAAGCCCGTTTACTGACGTCTCTTTTAAAGCAGGTTGTGTAGCCGGGGAAAGAGAACTTTGACACTCTCGGAAATTTGGAAAATGTCAGCTTTGGAATATCCTTTGTGTCCATGTAACGAGATGGTGTGATTTTCAACATGTTCTTCCtcattctgttttctgttttgttttgttttgtttggtggtggttttaacatattttaacatcTTGTCTTATTATGTCAGAGGAAATGActttttatattagtattatggaagtcatttagcagatgctaaATGGTTAATGGTTGTAAAATGCACTAACATACAGTTGTCTACATGTACACAGCAATAGAAAGATAAGAGCATcactatattaataaataatgacagtGCAGAACATGAAGGTTGATGAGAAATCAGAATGGTCTACAGGTGCAATCCAAACTGAGGTCCTGGGAGGATGGTCAGACACTGCAGTGCTGAGGCTCATCCACACTATGgggcagagagcagagaggagagtCTGGGGCAGTCAGATGCCTGAGGGAAGAAGTGGCTGACAAAAAGTGTCAACCAAAGGAAATCAAGAAAAGTAGTTCAAATTCTAGGACACGGGTTGGTAACAGACTTGACCTTGACTGTATGTCTCGATTCAAATCATGCAGTGGTTGCCATTCCTGCGCCTGGAGGATTGAGCTCTTCACTGTGTCCTTACCTGAACTAATGATGGTCTTGTATCAGCCTTTGgcctttgttttcagttcttaAACATGTGCAGTCAGGTCAGTAGGGAAGAATGGGTCTGGAATGGAAACCAGCAGAAACAGGGAGCCTCCTAGACCAGGGTTAGGATCCActgaaacaacacatttgtCAATATGATCTGCGTGTGAAAAGCAAACTGAACTGACATTTTATTAGGAGTATCTTTCGAAAAGGGGTGGATGGGAAATCTTATGACTAATCTGTGAGTCCCCGTGAGATTGTAAACATGATTGTGAACATCTCTTGGCTGCTGTCATTTGAATAATGATGTCCATGTAAACACCCTTCATAAAGAGCAGCTAAAGGGTCAGTGGTTCATAGATCCCGGTGCCCAGAACCCTGCTTTCCCAACTAGTgttcaaacacagacactgacttGCAGTGGCCTAGCCTAAGGGGGCTACCATCTCCAGTCGCACATTTCGGTGAAGTTGTAGAAATGTTGACCACCTCCCCAGCCCGCCTCATCAGAGAAAGCAAGTGAGAAACCATTATTCTGATCATCTCACAACACAACCACCACCCCCTTTCAGAGAGTCTCACTGTGCACTGCAAAGCTACGATGGCATTACTGGAATCTATAGTTTCATCATTGTTAATTTTCTTACCCTTGAACCCCTGGAAAATAAATTGTCTGGCTACACTACTGCTGacctgagaacaaaccagcagAGGCTAAGAGAGCCGAGATGTTCTGAAATAATGGGTCTCCTTCATTGGGTGTAGTGAATACATCGCCATTCATCAGCCAAAGCAGTTGTCACGCACTGTAATTCAACCCAAGTTTTTCCAAATGCCAGAAATTAAAAGATATAGCATTGTATAGCATATTAAGAGTGAAAACTCCCGAACAAAtgcttcaaatgtgttttttttaacattccaaTTTCTCCCAAAAATTGGAATAAGGCAACACTGTTATCCTCCAGTAACAAGGATCTGATTTGTACTGTATACACTGTCCCTTCTGTGTCCTCGGTGCTGTTGGACTCTGCATGACCTTCTCTTCTCTCCTGCCCCTTCCTGCTGTTGACTCCCAGATGACCCCTCCAGCTGTCTTAGAGGACACAGCACATGCAGTGTAAACACACCGACCCTCGATAATGAGACCATGTCCGTTGATCAACTGGGTTTATCACTGCTGCTCCCAGATGTGTTTGGTTTGAATCCTTAATTTGTGTTCAGCTTCTCTCCTGGAAAACTACTGCAGGTGACTCAGTGTTCACTTGGGAATCATTGCCATTCACAGGATGATGGACACACTATGGTATTTGGCATGGACACACGTGTGTTTGGAGAGGGTGGAAGTCTGGGACATCACGGGGATGTGGGGAAGTGATATGGGCAGAATTGCATGGCCAGCCCctttaagaaaaggaaaagaaaactcCCATTCTTCTTCTTAAGAGCTGCAtaagtctttaaaataaactgccatTTCTCACAAATACCAGTTTCTAGAAGAGCAAAGATGGATGAATGGGTTTGCTTTGTCTTGGTTAGCATGCGAGGTATGTTCAAAGTATCACAATGGACTTACATGGCAGCTGATGTGGAGTGGCtgagtgtaataataatacaataataatataaatgctgGCATGTTCTTTCTAAGTAATTggcaagaaaataatttgaataatgaattaaaaaataataatcgagAAGGCCTGTCAGTGTCGGGTAACAATGATCTATTGTGCCAGTGGAACTGTGCTGATTTGATCGGCCGAGAGCTCACACATTCTGGTTTTTGCATAAGCAATTAAGTTCACCTCATGAATTACTTTGaacatcacaaaataaaatggatgaaTACTTAACGATATAAAAAATCACCTctattgtcattgttttatgGTTTGTGCAATGACACAATTTAGTAAAAGTAGGCCTATAGTGCctgaatttaatgtttacactactttgtttttccatttaaaggcGACTTTAAAATCCAGTCCTCACTCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012547 True 3162 mRNA 0.43 3 21224741 21230841

Neighbor

gene id symbol gene type direction distance location
AMCG00012548 NA coding downstream 12725 21188177 ~ 21212016 (-)
AMCG00012545 NA coding downstream 103363 21120116 ~ 21121378 (-)
AMCG00012537 NA coding downstream 318980 20901724 ~ 20905761 (-)
AMCG00012527 NA coding downstream 362123 20859265 ~ 20862618 (-)
AMCG00012528 NA coding downstream 365538 20858725 ~ 20859203 (-)
AMCG00012552 NA coding upstream 38899 21269740 ~ 21274408 (-)
AMCG00012551 NA coding upstream 52460 21283301 ~ 21290412 (-)
AMCG00012554 NA coding upstream 118604 21349445 ~ 21358802 (-)
AMCG00012561 NA coding upstream 469210 21700051 ~ 21703968 (-)
AMCG00012562 NA coding upstream 508115 21738956 ~ 21740372 (-)
G137628 LOC100380645,LOC107688237,LOC108256176,LOC106605293,LOC108433883,LOC107592459 non-coding downstream 55383 21166458 ~ 21169358 (-)
G137619 NA non-coding downstream 127445 21096922 ~ 21097296 (-)
G137605 NA non-coding downstream 130745 21030092 ~ 21093996 (-)
G137601 NA non-coding downstream 184974 21034530 ~ 21039767 (-)
G137591 NA non-coding downstream 268363 20951938 ~ 20956378 (-)
G137699 NA non-coding upstream 72631 21303472 ~ 21306761 (-)
G137701 NA non-coding upstream 77377 21308218 ~ 21315238 (-)
G137711 NA non-coding upstream 133451 21364292 ~ 21364924 (-)
G137709 NA non-coding upstream 194330 21425171 ~ 21426245 (-)
G137733 NA non-coding upstream 419922 21650763 ~ 21657742 (-)
AMCG00012541 NA other downstream 182298 21040089 ~ 21042443 (-)
G137608 NA other downstream 186310 21035163 ~ 21038431 (-)
G137408 NA other downstream 953877 20261002 ~ 20270864 (-)
AMCG00012503 NA other downstream 1314363 19903106 ~ 19910378 (-)
G137246 NA other downstream 1431210 19714162 ~ 19793531 (-)
AMCG00012559 NA other upstream 202823 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 263386 21494227 ~ 21502199 (-)
AMCG00012564 NA other upstream 847332 22078173 ~ 22088469 (-)
AMCG00012566 NA other upstream 872812 22103653 ~ 22120556 (-)
G137974 LOC107575789 other upstream 1691042 22921883 ~ 23049378 (-)

Expression


Co-expression Network