AMCG00012549


Basic Information

Item Value
gene id AMCG00012549
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21300064 ~ 21307188 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012549
GTTCCGATCCCGGCCGCTCCCAatgccgaaccagaggtcccaaagaaagggaaaagaaaaaagaaaaaggtacctGCTCCAGTCTCGGCCTCGTCCGCTGCCGAAACAGAGGTCCTGACCTTGGCCGCGTCCGCCGCTGAGCCAGAGGTCCCAATCCCGGTCCCGAACccagccgccgccgccgccgatccagaggtcccgatcccggtcCCGAACCCGGGCGCCACCGCCGAGCCAGAGGTCTCGATCCAGGTAAAGATCCCGGCCGCCGCTGAACCAGTGGTCCCGTTCCAGATCCTGCCCGCCGCTGAACCAGTGGTCCCAGTCCAGATCCCGGCCGCCGCCCAGCCCGAGTGCCCAGCGGTTGCCGCCTTCGCCGCCGCCGCCCAGCCCGAGTTCCACTATTCCTACAAGATTGGCTACCAGCCCACATTCCCCCAGCATGGCAGCACGCTTCCAGGCATGGACAAATCTGCCTTCTTCAGAGAGCTGAAGAACAGACATGGCTACATCCTGGTCACCACCAATGAGCAGTGGATCAGACTCTCCCCAAAGAACATCTACTATCTGGGTCAGCCCATGTACTTCCAGGCCACAGGCTACTTTGCCACTGAAGGGCAGCGGCTGTTCATCCAGTCCTGCTATGCCACGGCCTCTCCGGATCGGCACTCCAAGCCCAGGTTCACTGTGATTGACAACTTTGGGTGCCTGGTAGACAGCAAGGCTGATGGGTGCCAGTCGAGGTTTGTGCCATACATGAGGAAGGATGTTCTCCGCTTCACCATTGATGCCTTCCTGTTTCAGAAGACCTTGTCTGAGCATGGGATGACTGACCTGTACATGCACTGCACCATGACTGTGGCAGAACATGTGACTCCAGGCACCAAATCCTGCACCTACAACCGGAAAGCTAAAAGGTGGGAGGAGCTGTATGGGAaccatgctgtgtgtgtgtgctgtgactCCAGGTGTGCTGGGGACCGGGCAGAAGGTCAGAGGAGCAGCCTAGTGACCAGTCACCTGCTGCCCTTGGAGCATCCTGGTGCTAAAATGGACTCTGTAGAAGGAGCCCGTAGGTCAGGGAAAGCAGTGGTTCCAGGATGGGGCTCCCATGCTGAAGGAGAAGCTAGGCAAGTGAACTCTCAGCCAGAGGAGTCTGCCGCAGTAGAGGTGCATTCCTGGGATCCCTCTGAAGAGGGACCCGTGACATCAGAGGACTATGCAGCTGAAGTGTTTAAAGGTGAGGAGTCATCATGGGCTAGCCTTCAGGATGAAGATGCGCAAGAAGAGTTCCATAGAGAGGAGACTGACGAGGAGGATGACCGATTCCCAGTCTAACTGGATGGCTGGTAGGTCCCGGAGGAATTCCAGTGTCTGCTTGTTGCAGTGGAACCAATAAACCTTCAAAATGCATCTGGGTCTCCTCTTTATTCCAATGCACAGCTACCAGTACTTCTGAC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012549 True 1460 mRNA 0.57 8 21300064 21307188

Neighbor

gene id symbol gene type direction distance location
AMCG00012542 nr2f5,LOC108433883,LOC107592459,LOC107726692,LOC105005680,LOC107592141,LOC103038004,LOC107671473,LOC100380645,LOC105891836 coding upstream 133287 21148238 ~ 21166777 (+)
AMCG00012543 sv2a,LOC107592458,LOC107726650,LOC107671386 coding upstream 187117 21109538 ~ 21112947 (+)
AMCG00012544 sv2a,LOC107592174 coding upstream 190816 21105119 ~ 21109248 (+)
AMCG00012538 sf3b4 coding upstream 249259 21044249 ~ 21050805 (+)
AMCG00012540 NA coding upstream 261635 21013421 ~ 21038429 (+)
AMCG00012550 NA coding downstream 7847 21315035 ~ 21317648 (+)
AMCG00012553 NA coding downstream 127257 21434445 ~ 21436426 (+)
AMCG00012555 NA coding downstream 131295 21438483 ~ 21443188 (+)
AMCG00012557 NA coding downstream 183661 21490849 ~ 21491478 (+)
AMCG00012560 NA coding downstream 335546 21642734 ~ 21646358 (+)
G137631 LOC107575789 non-coding upstream 32152 21231980 ~ 21267912 (+)
G137634 NA non-coding upstream 79020 21220199 ~ 21221044 (+)
G137539 NA non-coding upstream 542800 20757030 ~ 20757264 (+)
G137494 NA non-coding upstream 766105 20533752 ~ 20533959 (+)
G137364 NA non-coding upstream 971240 20321606 ~ 20328824 (+)
G137645 NA non-coding downstream 1030 21308218 ~ 21309033 (+)
G137669 NA non-coding downstream 294811 21601999 ~ 21602314 (+)
G137749 NA non-coding downstream 472878 21780066 ~ 21786045 (+)
G137754 NA non-coding downstream 491315 21798503 ~ 21813863 (+)
G137761 NA non-coding downstream 529054 21836242 ~ 21958354 (+)
AMCG00012546 NA other upstream 47061 21245663 ~ 21253003 (+)
G137636 NA other upstream 69228 21224741 ~ 21230836 (+)
G137633 NA other upstream 80901 21213597 ~ 21219163 (+)
G137583 NA other upstream 240801 21056695 ~ 21059263 (+)
AMCG00012539 otud7b,LOC106581836 other upstream 260315 20992490 ~ 21039749 (+)
G137764 NA other downstream 547518 21854706 ~ 21876542 (+)
G137775 NA other downstream 625107 21932295 ~ 21958158 (+)
G137899 NA other downstream 1258236 22565424 ~ 22566106 (+)
G137947 NA other downstream 1510765 22817953 ~ 22818458 (+)
AMCG00012579 NA other downstream 1573171 22880359 ~ 22911656 (+)

Expression


Co-expression Network