AMCG00012551


Basic Information

Item Value
gene id AMCG00012551
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21283301 ~ 21290412 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012551
ctgcaacaaaaataatgtcCTTGTCTATAGGCTATAGTGTGAGCTCCCCTGGAGCTTCCAGTTTTCTTGGACAAAGGAGGAGACTTGTTTTTTACAGAAACAGTTGGCAACCACGGTTGTGCAGGAAGCTAGCGTTTCCTTAAACTTGTCGAATCAGCATTCATTCCTTCCACAAGACACAAAGAAGGGGGGATATGCGGTTACTATATTGCGATCGTCCGGGTTGTAAAGACAGAAACGAAAGACATACGACATCACTCATTGTGGGAGCCCTGACCAGCTGTTTAAGATGTTAACCTCTGTCCCCACTAACGGGGGCATGGTGATCATCACCCAGATGTGCCCACAGGGTCCAAGCGCTGTGCCCACTGGTGCTCCCCAGGCCGAGTCGGTGCTGCCACACAACTACACCTCCCCAAGGGATGCATCTCTAAAGCGCTTTGTGAAAGGAGAGCCCACAGCCCTGGGGGTGGTCCAGATCATGATCGGCCTTTTCTTTATCGGATTAGGCGTGGTAACTCTGCAAGAGAGATTTATAGTAGGAGTCCCAATTTGGACAGGGGCAATGCATATTGTCTCTGGGGCTCTGAGTATTGCAGGtgagaagaggaagaaaaataacatctgtCTGATCAAGGCAGCCCTGTCCATGAATATTGTGAGCGCGAATAATTTGTACATGGTGGCAGTGTGGGTAATTCTGTTTTTCTCGATCCTGGAGTTCTGCGTGGCCATCTCTGTTTCGGCCTTTGGGTGCAAAGCTGTATGCGATGGCAACACTACGCCTGTGATTGTCATCCAGTATGGGGCCAACCCTCAGCCAGCAACACAACCCAGCAATGACCCAGGCTACCAGCTGGCACCGGACACAGAGCAGGACACTTTTCCCAAGACCCCCCCTCCGCAGTAtacagagtgacagagagagccGGCTGGACCTgcacagggggagagaggggaacacCGAGTCACCTGCACAGGCACTGAAGGGGGAGTGGGGGTTTCTAGAGGAAGAGCCATGAAGTCAGCCATCTTCAGAGCTGCCTTTCACACACTGTGTTTACAACTCGCCCTCGATGCTATCAGAGTCCTGCTGGTTGGATGGGTTTAGCTCCACTGATCACTTCCTCTCCGCTTCAGTGAGACGAGATGGACAGCTCCATCAATGCTGCAAATATATTACTacacatagttttttttttttttaatgctttaattaatgaaatttaagaaataagcaaataaatctATGCAGACAattcctgtctctctgtcctttGAGAGACGCCACTTATCAGGGATATCAaacctgcattttaaattcaatgcaGAGTTTCCAATGGACCAGATGCACAGAGGTCTTGAAAAGTACCCAGTCTCTTGTCCACAATACACCACTTTCAAGGTTGTCTCATACAATGGAGACAAAACAGGTTGTATTTGTGGGCATCAGAGCTACCCTTTTGTGGTGGCTCCTCCCTTCATTTAGAGTCAGATTAAGGTTATTGGTTTAATTGTAGTTCTGGTTATGATCACTGCAGACGCCACTTTTCGGATGTGACTTACTACATTTCTGTGCCTTGTGCTGGTTGGATGGGGTCTGTTCCACTGCTCACTTCCTCTCCCAACTTCAGCGACATGAGATGGACAGTATTTTATTACTGTCACTTTGAATagcaaaataattgaaaaatcaaTGACAGTTAACTAAATGCATTGTTATAAATATAGTTAAGGCTGGCAATTGACATACATCAAGGTACAAACTAAatcgataggttgtgaatgcaaccccggttatctgagagagaatactacccaaaggggatgGGCTTAAGCCTGTTACCAGGGCCCCTTCCTGGTTCCTGCTTGAATATATtgcataatgtattgtaataaatCCTCTATTTGCTTGAAGTCAAAGGACTCCCGCACAACCTTGCAGCTTTTATGTAGCATTCTCTTTTTTTACATATCCAGGGTTGCATTCTCAAGTCGAGAATACTACCCCAAGGGTGAGGGGTTCAAGCCGCTGAAAGGGAGAACGCCGTCAGGCTGGTAAGGATACCAGCCCTGAGGCCATAACCTGCTAAGGAGAAGGactcaacaaataaataattttaacacAAGGAACAATGGGACCACAGTTACGCTCCACTGGAATAGAATGTGAACAGCATCACTGCATTTATAAATTAGTGAAAGCTGGATGCTCTTGTTGTTGTAGTATCACCGATTGACCGAAGGGCTGCAGAGACACAGGCTGAACTGGTTTCAGTAACAagttgggtttatttatttactattatatGTTCTCCCACATTAATGTAACAGAACACAAATACCTTGCCAACACTTCAGGGGGGGTCCCTAACAACAAAGGTTCAAAACATAATGTCAAAACCCAGGGCCGGCTGAATAGTCTTTCCAATATTCCCTAATGAATTTAAGGTAAAAGTGACATTAACTCTAGCTAACTAGCTATTTAAATGAGCGAGCGTTACTAGTATCGTCCAAAGTAAGTTGGCTAGTTGTAACACTGCTCCAACAGTAACTATGCAATTAGATAAACTATtcattcatcacatcacatcacctCTGTTCTTATAaatttttcctcctcttcttctttttcttccttgggCACCAGAGGACTTTGGTCTTTTTGGCATAGTTTGAAGTAGGCTATTGATGCTAATTTATCATTTTTCGTGTTAAGTGTCACTCACTGCTTCAGATAACTGAACTCGCCCCCCCCCAATCAGGTCAGTCTAACTATGAGATTGgcaggggggttggggggattGATGTGCCAGGATAGGGTAAAGCTGTGGGCAACAAAGGAAATACGGCCTAATAAGTGGGGGCTTTcgcttttttttaatattttgaattaatagtattaaaatagtattactaaaaaatatttaaaaataaataaataaaaatcttcaCTCATTCGGGCACCCCTATGGATGGACAGAACTCTAGCATTTGCCTATTGCGCCTATTACACGGGCCGGCCCTGTCAAAACCAAATAATACTTAACTGCAAAAATCtcttttaaatacagcaaaagTTTAATTCAGTACATGAGGAATTCAACTCACCATCCCCCAGGACTCATGGTTTTGAAATAACTGgcttcacttcctcctttaatACAATGTGTTCTggttatttgattttttttgtacagaagACACTTAAAATCCCCTGCTTCCAAGTCAGAGGAGTTTTTGCAAAATTACCTAGCCAAACAATAAAAGACTTAGTATAACTCTGGACTCCCAGTTTATGTTTTTGCTTGATTTCCTTGTAtttgtcagtttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012551 True 3334 mRNA 0.43 7 21283301 21290412

Neighbor

gene id symbol gene type direction distance location
AMCG00012552 NA coding downstream 8893 21269740 ~ 21274408 (-)
AMCG00012547 NA coding downstream 52460 21224741 ~ 21230841 (-)
AMCG00012548 NA coding downstream 71285 21188177 ~ 21212016 (-)
AMCG00012545 NA coding downstream 161923 21120116 ~ 21121378 (-)
AMCG00012537 NA coding downstream 377540 20901724 ~ 20905761 (-)
AMCG00012554 NA coding upstream 59033 21349445 ~ 21358802 (-)
AMCG00012561 NA coding upstream 409639 21700051 ~ 21703968 (-)
AMCG00012562 NA coding upstream 448544 21738956 ~ 21740372 (-)
AMCG00012563 NA coding upstream 737206 22027618 ~ 22039234 (-)
AMCG00012565 NA coding upstream 862007 22152419 ~ 22165738 (-)
G137628 LOC100380645,LOC107688237,LOC108256176,LOC106605293,LOC108433883,LOC107592459 non-coding downstream 113943 21166458 ~ 21169358 (-)
G137619 NA non-coding downstream 186005 21096922 ~ 21097296 (-)
G137605 NA non-coding downstream 189305 21030092 ~ 21093996 (-)
G137601 NA non-coding downstream 243534 21034530 ~ 21039767 (-)
G137591 NA non-coding downstream 326923 20951938 ~ 20956378 (-)
G137699 NA non-coding upstream 13060 21303472 ~ 21306761 (-)
G137701 NA non-coding upstream 17806 21308218 ~ 21315238 (-)
G137711 NA non-coding upstream 73880 21364292 ~ 21364924 (-)
G137709 NA non-coding upstream 134759 21425171 ~ 21426245 (-)
G137733 NA non-coding upstream 360351 21650763 ~ 21657742 (-)
AMCG00012541 NA other downstream 240858 21040089 ~ 21042443 (-)
G137608 NA other downstream 244870 21035163 ~ 21038431 (-)
G137408 NA other downstream 1012437 20261002 ~ 20270864 (-)
AMCG00012503 NA other downstream 1372923 19903106 ~ 19910378 (-)
G137246 NA other downstream 1489770 19714162 ~ 19793531 (-)
AMCG00012559 NA other upstream 143252 21433664 ~ 21635426 (-)
AMCG00012556 NA other upstream 203815 21494227 ~ 21502199 (-)
AMCG00012564 NA other upstream 787761 22078173 ~ 22088469 (-)
AMCG00012566 NA other upstream 813241 22103653 ~ 22120556 (-)
G137974 LOC107575789 other upstream 1631471 22921883 ~ 23049378 (-)

Expression


Co-expression Network