AMCG00012557


Basic Information

Item Value
gene id AMCG00012557
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21490849 ~ 21491478 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012557
ATGATCCACGATCCACAAGGTACATCTAACTTCTTCTCAATGGCAGAGCTGATCATCCCCATTGTAGGCCTTGTGGGCTCCCTCACCAAGGTGGTGGTGCAGCACATTGAGAACCAGGAGGTCAAGACCCTGCAGATGGAGATGAGCAAACTCCATAAAGCCATGGATGAGATCTCCAGTAAGCACAATGATATCCTTCTGCAGATTAAGAAGGAGACCATGAACACTCAGTACTTTAATGTGAAGGAGCGCATCAAACGTCAATTCAGCAGCTTCATGGAGATGATGAAGGCCAAGCCGGAGGACACAAAGAAGAAACGTGAAGAATTCAAGAAGATTTTTGAAAAGGAGATGCTAGATGACAACCTGAATACACTCTTCAACAGTGTGATAGGCACTAAAATGATGTTTGGCAAGAACATCCTGGAGGTGTACATGGAGGACCGCCAAAAGATGCAGTGCATCTGCAATGACCTCAACCACTTATTTGCTATTGGGCTCATGGCGCTCATGGGCTACGCAGCCATCCTGGGAAACCCTGCTTATGAGGACGAGCTGAGGTCAGAGTGGGCtgagaaaatgaagaaagtCAAGGAGAGAATGGATCAGGTGCTGATAAGTTGCACCTGA

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012557 True 630 mRNA 0.47 1 21490849 21491478

Neighbor

gene id symbol gene type direction distance location
AMCG00012555 NA coding upstream 47661 21438483 ~ 21443188 (+)
AMCG00012553 NA coding upstream 54423 21434445 ~ 21436426 (+)
AMCG00012550 NA coding upstream 173201 21315035 ~ 21317648 (+)
AMCG00012549 NA coding upstream 183661 21300064 ~ 21307188 (+)
AMCG00012542 nr2f5,LOC108433883,LOC107592459,LOC107726692,LOC105005680,LOC107592141,LOC103038004,LOC107671473,LOC100380645,LOC105891836 coding upstream 324072 21148238 ~ 21166777 (+)
AMCG00012560 NA coding downstream 151256 21642734 ~ 21646358 (+)
AMCG00012558 NA coding downstream 155900 21647378 ~ 21653300 (+)
AMCG00012567 NA coding downstream 680807 22172285 ~ 22193641 (+)
AMCG00012569 LOC106580111 coding downstream 729155 22220633 ~ 22320428 (+)
AMCG00012568 NA coding downstream 829436 22320914 ~ 22329746 (+)
G137645 NA non-coding upstream 181816 21308218 ~ 21309033 (+)
G137631 LOC107575789 non-coding upstream 222937 21231980 ~ 21267912 (+)
G137634 NA non-coding upstream 269805 21220199 ~ 21221044 (+)
G137539 NA non-coding upstream 733585 20757030 ~ 20757264 (+)
G137494 NA non-coding upstream 956890 20533752 ~ 20533959 (+)
G137669 NA non-coding downstream 110521 21601999 ~ 21602314 (+)
G137749 NA non-coding downstream 288588 21780066 ~ 21786045 (+)
G137754 NA non-coding downstream 307025 21798503 ~ 21813863 (+)
G137761 NA non-coding downstream 344764 21836242 ~ 21958354 (+)
G137814 NA non-coding downstream 513903 22005381 ~ 22005678 (+)
G137629 NA other upstream 158779 21270360 ~ 21332070 (+)
G137644 NA other upstream 174398 21303225 ~ 21316451 (+)
AMCG00012546 NA other upstream 237846 21245663 ~ 21253003 (+)
G137636 NA other upstream 260013 21224741 ~ 21230836 (+)
G137633 NA other upstream 271686 21213597 ~ 21219163 (+)
G137764 NA other downstream 363228 21854706 ~ 21876542 (+)
G137775 NA other downstream 440817 21932295 ~ 21958158 (+)
G137899 NA other downstream 1073946 22565424 ~ 22566106 (+)
G137947 NA other downstream 1326475 22817953 ~ 22818458 (+)
AMCG00012579 NA other downstream 1388881 22880359 ~ 22911656 (+)

Expression


Co-expression Network