AMCG00012559


Basic Information

Item Value
gene id AMCG00012559
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21433664 ~ 21635426 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012559
ATGCAGGCAGCGAGCATGTCGCCTGGGACATCCAGAAGCGATGTCCCGCTCCTACGCTTCAAAAGCCCGGATGAGGGGCGGGGCTTGTGCCTCAGTTCAAAGCGCGGGAAATTAAACATGTGGGTAGCTGAAGCCCTGCACTGTGAGGCTGTCCCTGGTGTCCTGAAGNNNNNNNNNNCTGGTGCTGGCAGAGTGTGTGGCATCTCGAAAGAGGGCAAAGTTGTGGACTTCCGTGACGATGGTTGGGTTGACCTAGAGGCATCTGGTAAACATTGGCATTGTCTGTCTAAACCACAGGCCTGCACTGAGCTACGATGGCTCTGGCAGTGTGTCCTGGATGGCCGTCCCAGGCGAGCTCAAGTACTACTCCTGTGGGCCTGTTGGGTGCTGGGGAGCTCCCTGTCCATGGTGGAAGTGAGCGCAGATGGTGAAGTGCATGGAGTGAACAAACATGGCTCGGTATTCAAAAGGATTGGTGTTAAGAAGCAAAAAACCCGCCGGGTTTTCGGGCATGCACAGATCGCCCTCAATGCCGAGGAGTTTGGGTGGATGGAGGAATACCTCGGCATTCGGGGCAATCTGCCTGGCAAGCCGTGCCctctcaaagaaaaacaaaggccAATTGACTCTGGAGAGCAGGAGGAGAGTGAGGCATCGGGGTCAGAGGGGGGACAGCTCCCTTCGACTCctaggaggaagaggagggccCCAATTCACCTTTCAATTGAGGGGGAGGGAGTGGCATCAGGGTCAGTGTGGGGACAGCTCCCTTCACCTCCAAGGAGGAAAAGGAGGGCCCCCCTTCACCTTTcaagtgaggaggaggaggaggaggaaaggGAACCCAGGACGCCAACCAGCATGGTCCAGCTGGAGCACTGTTACTCTGTGTTGAAAAACATCCCGGCCCCCACCGCTGCCAGGAGAGGAGCCAGGAGGAACCTGGCAGTTGAGATAGGGGGCACTGACACAGAGGAAGCGGCAGGCGCTGGGCAGTCTGGACCAGACCAACCCTTACCCCTCCAGCCTGACCTCCCCTCATCTCCCCTTGCCAACCCACTCTCAGCGGTCTCCTCCACCTACAGCTCCCCGTCCTCCTACAGTGGGGATTTCTATTTGAGGGATTGGGAGGTGGATGGCCAGGGGGAGATAATCCGGTTGACTGAGGgtCTCTCCCCTACCAAAGACATTTCAGGGGTGGAAAAGCAAGGTGACTTTGACTGGAGGCACCTGAGCTGA
>TU173202
CAGGTGTGTCTAGCGGTGGACCGGGGTATTTAAATGCCTGTGTGTGAACAGTTCTAATATATCAATTCTCTGAGAGTGATAGCAACCATGAAAGGAGGGATTGTTGGTGTGGTTTTGTTGGTGGGTTCTGGCATTGTGTGGGTAGCTGAAGCCCTGCACTGTGAGGCTGTCCCTGGTGTCCTGAAGNNNNNNNNNNCTGGTGCTGGCAGAGTGTGTGGCATCTCGAAAGAGGGCAAAGTTGTGGACTTCCGTGACGATGGTTGGGTTGACCTAGAGGCATCTGGTAAACATGTCAGTGTAGGGCCTGCTGGGCTCTGGAGAGTTGGCCTTGAAGACCAGGCCATCAAGGCCAACTCTCCAGAGCCCAGCAGGCCCTACACTgaccttcttcttcttattatttttatttcttggcacacgcccttatccagggcgacttacaacataagtgcaaaaatacagagaagtacaaggcaatcattacaaattcaacttagctaaaacatagcaattcaaaatacattttacaaattccaattccaatttacacaagtacagtaaaagACTTCCTACATcatggacggtgaaagctatgtgctgtcaagatgtagggttacagactagggctacgggaaagggagcaaggaggaaaacaatcaagaacgcgaggagcataataagctgaaattttatctagcagggatagatgACCAATATTACAAGTGGTGTcagaagagatgcgtcttgagtaagcgccggaatgaggtcaagggctctgctgttttgacttcagtgggcaggtcgttccaccacttaagggccagggatgagaaggagcgggctctgaaGGAAGGAGAGTGACATGGTTACCAGATGCCTCTAGATCAACCCAACCATCATCACAGAACTCCACGACTTTGCCCTCTTTCAAGATGCCACACACTCTGCCAGCACCAGCATCAATCTGCTTCAGGACACCAGGGACAGCCTCACACTGCAGGGCTTCAGCTACCCACACTGAAGGGAGAGGGATCCATTAGAGCAGTACGCAGTCACCATCTCCATGTGCATCTCAAGCAGAATACATTTCATCTCCATAACTAATAGGATTTAGattgaaaacaacattaatcCAGTAGAAGAGGGCTACACAAACTACAAgtcttcaaacaaaacagtagCTAATGGGCTGTGTGAAACACTTACCTATGCCAGAACCCACCAGCAAAACCACAATGACAATCCCTACTCTCATGGTTGTTGCTAGTCCCAGACAATTGATACAAAGGAACTGTTCACACACAGGCATTTGAATACCAAGTCCACCTTTAGACACACCTGTCTAATCGatggttaattgattaattgagatGCACAGCTTCAAAGGAGAGACCTAATTAGTCATAATCTTCTTAATGAACTCAACCTATATGACCATTGGCCAGGGTAGATGACATGGCAAGTGGCACCATTTGCTTTGACAATTAAATGATTAACATTTCATGAGAGACTGCATGTGTTCTTCGCAAATGTCTATTTCCGCCATCAATACTTATTAGCTCTCAAAATTCCAGCTGCTGTCTGAgttctgttttcattgatttctGGTCCGTATTGGGTCAGTTGAGTCATGACTTTGTGTCATGTTTAAATTGAGTGATTCCATTAAGTATTTGCCACTCCTAACTGGAATTAACTGgcaattttatttgaatgaaccGTTGGTCAATCTGTTTCTAGCAATACACAGAACCTGgcatatcaatcaatcaattttatttgtaccttcacagggtagccacagagtgctttacagactagtaaacatacaacaaatgtacagcaaaataaaagaatacataaaaaatacaataaagttaaattaaatagaaacagtttcatttaaacagtttacatgatctaaaatagtgtaaatgaatatttaaataaataaaccatttaggagaggagagaaaaacaaaaaactcctctGGATGGtgtgtaggagaaaataaatctctgggggtccatggcttagggcctaggcctaatgg

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012559 False 1239 mRNA 0.57 13 21609574 21635426
TU173202 True 2054 TUCP 0.42 3 21433664 21618770

Neighbor

gene id symbol gene type direction distance location
AMCG00012554 NA coding downstream 74862 21349445 ~ 21358802 (-)
AMCG00012551 NA coding downstream 143252 21283301 ~ 21290412 (-)
AMCG00012552 NA coding downstream 159256 21269740 ~ 21274408 (-)
AMCG00012547 NA coding downstream 202823 21224741 ~ 21230841 (-)
AMCG00012548 NA coding downstream 221648 21188177 ~ 21212016 (-)
AMCG00012561 NA coding upstream 64625 21700051 ~ 21703968 (-)
AMCG00012562 NA coding upstream 103530 21738956 ~ 21740372 (-)
AMCG00012563 NA coding upstream 392192 22027618 ~ 22039234 (-)
AMCG00012565 NA coding upstream 516993 22152419 ~ 22165738 (-)
AMCG00012572 NA coding upstream 952714 22588140 ~ 22601168 (-)
G137709 NA non-coding downstream 7419 21425171 ~ 21426245 (-)
G137711 NA non-coding downstream 68740 21364292 ~ 21364924 (-)
G137701 NA non-coding downstream 118426 21308218 ~ 21315238 (-)
G137699 NA non-coding downstream 126903 21303472 ~ 21306761 (-)
G137628 LOC100380645,LOC107688237,LOC108256176,LOC106605293,LOC108433883,LOC107592459 non-coding downstream 264306 21166458 ~ 21169358 (-)
G137733 NA non-coding upstream 15337 21650763 ~ 21657742 (-)
G137742 NA non-coding upstream 51604 21687030 ~ 21687264 (-)
G137828 NA non-coding upstream 440259 22075685 ~ 22076815 (-)
G137842 LOC107575789 non-coding upstream 492519 22127945 ~ 22128292 (-)
G137847 NA non-coding upstream 545405 22180831 ~ 22181039 (-)
AMCG00012541 NA other downstream 391221 21040089 ~ 21042443 (-)
G137608 NA other downstream 395233 21035163 ~ 21038431 (-)
G137408 NA other downstream 1162800 20261002 ~ 20270864 (-)
AMCG00012503 NA other downstream 1523286 19903106 ~ 19910378 (-)
G137246 NA other downstream 1640133 19714162 ~ 19793531 (-)
AMCG00012564 NA other upstream 442747 22078173 ~ 22088469 (-)
AMCG00012566 NA other upstream 468227 22103653 ~ 22120556 (-)
G137974 LOC107575789 other upstream 1286457 22921883 ~ 23049378 (-)
G137996 NA other upstream 1468041 23103467 ~ 23120688 (-)
AMCG00012594 NA other upstream 2138051 23773477 ~ 23776880 (-)

Expression


Co-expression Network