AMCG00012568


Basic Information

Item Value
gene id AMCG00012568
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22320914 ~ 22329746 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012568
ATGGAGGGTGTAAGACGAATCATTCTCCTATATGGGCTCCTTCACCTCCTCTCCAATCCTGGCATCTTGGGAAATGTGATCACCGGCACTCCAGATCAATGCCAAGAGGCTGAGTTTGTGCCTGGCTACAACTTGGCAGGGGAAGGCTTTGATATTGTAAAAATGGAACGTAAAGGTGCCTATGTGATTAACATGGAAGACTGGCAAAAGGCTAATGGCACCTGTACCCTTAAACGTAATCGTTATCTAGGTGGGAAATTGCAAAAGATCCCTTTGGCAATAGTGGACTGGAGAGCCCTCTCCAACTGTAAGATGAAGGTATCCAGTACAATCTACGAATCCAGCGAATCTCTTGTGAATGACACCACTTCCAATGTGGAAAACAACTGGAAAGTCGGCCTAGATGTGAATGTGAATCCCAATGTAAAAGTTGGGGTTGCTCTGGGAGGCACCCATTCCAGAGCAGCTAATTATGCCATGCAGAAATCAAAGGAagataaatacagttttactaGCCATCAAGTCGACTGCAAGTTCTACAGGTACAGGCTGGTGACAAATCCCCCAATTCACAAAGAATTTCAAGAGTCCATCAAGTTGCTGCCTAAGAGGTACAGTTCTGAAACCAAAGAGCAGCATGTGCAGCTAGGTGGAAAAGTCAGTAGCATCACATCTATCAAATCCTGCCAAGCGACCATGAATGGAATGACTGACACTGCAGTGAAAGACTGCCTTGATGTGGAGGCCTCTGCCACTATTGCTATGACAGGCTCAGTGAAGACTGAGGCCCACCACTGCAAGAGTTTGCTAAAGAAGATGAACTCAGCACAGAGTTTCAGCAGCATGTTCAGCGACCGTCACAGCGAAATCATTGGAGGACAGATCGATACAGCAGATCTCCTCTTCTCAAGTGCTGACCCCACCGCTTACAAGAACTGGCTTCAGTCCATAAAAACTATGCCAGATGTGGTGTCCTATGCTCTTATTCCCCTTCACACATTGATTCCGATTAAAGATCCTGTTCATAATGGTTTAAAGCAAGCATTGGTAGACTACATACTTGAGAATGCCCTTTTGAAGAAATGCTCAGAAAAATGTGAGATAGGAACCAAATCTAGTGCTAGGGACTGTTGTGCCTGTGTctgcaatgcaaataaaaacctCAGGTCCAACTGCTGCCCAGCAGCAAAGGGACTTGCTGAGCTCAACGTGTATGACCTTAGAGCAGAGAAACTATATGGAGACCTATGGACAGAAACAGATGGTTCAGTTCGGGTTTCATATGGTGAAAAGATTAGAAGGACTGGAATTGTTAATAACAATGACAATCCAATATGGAGAGAACGATTGGAATTTGTAAGCATCAAGATAGACATGGCCtctaaattaacatttcaagtGTATGATGAAGACAGTGTTTGGAACAGTGATCTGCTGGGGGAATGCTCTTTCACACTTAAACAGGGAACTGTGAAAGACATCTGCACATTTCAGCATGGTACATTCTTTTTCACCTATAATGTGCAATGTGCCCCTAGTCTGGGTGGCTCTGAGTGCAATGACTACATTTCCTCTCCCATGAGTCCCAGCCTTTCAAAGAAATTCCAAAGAAGGGAGGATCGGCTATACCCCGCTCTTCCTCCCCCGTATGTGCCAGCATTACAAGATGACATAGATGATGAAAATGAGCAGGCCGAGGTACAAGGAGGGGGGCCTGATGCCCAGGCACTCCAGAGCAAATCCTCCCATCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012568 True 1755 mRNA 0.45 5 22320914 22329746

Neighbor

gene id symbol gene type direction distance location
AMCG00012569 LOC106580111 coding upstream 486 22220633 ~ 22320428 (+)
AMCG00012567 NA coding upstream 127273 22172285 ~ 22193641 (+)
AMCG00012558 NA coding upstream 667614 21647378 ~ 21653300 (+)
AMCG00012560 NA coding upstream 674556 21642734 ~ 21646358 (+)
AMCG00012557 NA coding upstream 829436 21490849 ~ 21491478 (+)
AMCG00012570 NA coding downstream 60456 22390202 ~ 22430060 (+)
AMCG00012571 NA coding downstream 122389 22452135 ~ 22455561 (+)
AMCG00012577 NA coding downstream 255955 22585701 ~ 22588205 (+)
AMCG00012576 NA coding downstream 335735 22665481 ~ 22669344 (+)
AMCG00012581 NA coding downstream 530333 22860079 ~ 22862823 (+)
G137827 NA non-coding upstream 244044 22075843 ~ 22076870 (+)
G137814 NA non-coding upstream 315236 22005381 ~ 22005678 (+)
G137761 NA non-coding upstream 362560 21836242 ~ 21958354 (+)
G137754 NA non-coding upstream 507051 21798503 ~ 21813863 (+)
G137749 NA non-coding upstream 534869 21780066 ~ 21786045 (+)
G137951 LOC100846954,LOC107575789 non-coding downstream 591443 22921189 ~ 22922372 (+)
G137984 NA non-coding downstream 728340 23058086 ~ 23058391 (+)
G138010 NA non-coding downstream 833245 23162991 ~ 23163619 (+)
G138034 NA non-coding downstream 945918 23275664 ~ 23275950 (+)
G138042 NA non-coding downstream 1468860 23798606 ~ 23843211 (+)
G137775 NA other upstream 362756 21932295 ~ 21958158 (+)
G137764 NA other upstream 444372 21854706 ~ 21876542 (+)
G137629 NA other upstream 988844 21270360 ~ 21332070 (+)
G137644 NA other upstream 1004463 21303225 ~ 21316451 (+)
AMCG00012546 NA other upstream 1067911 21245663 ~ 21253003 (+)
G137899 NA other downstream 235678 22565424 ~ 22566106 (+)
G137947 NA other downstream 488207 22817953 ~ 22818458 (+)
AMCG00012579 NA other downstream 550613 22880359 ~ 22911656 (+)
AMCG00012593 NA other downstream 1367678 23697424 ~ 23742591 (+)

Expression


Co-expression Network