AMCG00012576


Basic Information

Item Value
gene id AMCG00012576
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22665481 ~ 22669344 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012576
TGGGAATCAGATTGACCAGCAGGAAACTTCATTGTTGAAGACAGAAGACGAGATGGCTAAACTGCAATGTACCTTCAGCACAAGCAGCTTCAGCTATTACCTCCACTGGTATCGCCAGTATCCTGGGACAGCACCTGAGTTTTTACTGTTTAATGGGACAAGCAGCCACAGTGCAGAGTTTGCCAGAAAACGATTTTCTTCCActgcaaacaaaaccaaaggtTTAACAGTTTTAACTATTTCTGGTGCTCAGATGGAAGACAGCGCTGCTTATTACTGTGCACTTCAGCCCACAGCGGTATTATACAGAGAACATATGTACAAAAAAAGTGTTATACTGTGTTTAATCGATCACttattattccttattttgtacCACTTTTCTTTAGGCATGACACAAGGTGATTCAGTCCATCAATTTCCCTCCTATCATGTGTCAGAACAggagaaaataacattatattgtCGGTATGAAACATTGTCAACCCCCAACCTTTTCTGGTACATTCAGGATGGCAATAAAGCTCCACAGTTCATGATGAGTAACTACCTGAATGAAGATGCACGATTTAAAGACCGTTTCTCTGCACATCACGACAGCAATAAGAAGTTCTTTAATCTGACTCTATCTGCAGCTGTGTTGTCTGACTCTGCAACATACTTCTGTGCCATGAGGCCCACACTGTGTCAGCCTGTACATCTCCTCACACAAAAAAACCCTTGTACTAGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012576 True 733 mRNA 0.41 2 22665481 22669344

Neighbor

gene id symbol gene type direction distance location
AMCG00012577 NA coding upstream 77276 22585701 ~ 22588205 (+)
AMCG00012571 NA coding upstream 209920 22452135 ~ 22455561 (+)
AMCG00012570 NA coding upstream 235421 22390202 ~ 22430060 (+)
AMCG00012568 NA coding upstream 335735 22320914 ~ 22329746 (+)
AMCG00012569 LOC106580111 coding upstream 345053 22220633 ~ 22320428 (+)
AMCG00012581 NA coding downstream 190735 22860079 ~ 22862823 (+)
AMCG00012580 NA coding downstream 266926 22936270 ~ 22950900 (+)
AMCG00012578 NA coding downstream 291854 22961198 ~ 22966195 (+)
AMCG00012583 NA coding downstream 373144 23042488 ~ 23092426 (+)
AMCG00012585 NA coding downstream 517543 23186887 ~ 23230915 (+)
G137851 NA non-coding upstream 339131 22308413 ~ 22326350 (+)
G137827 NA non-coding upstream 588611 22075843 ~ 22076870 (+)
G137814 NA non-coding upstream 659803 22005381 ~ 22005678 (+)
G137761 NA non-coding upstream 707127 21836242 ~ 21958354 (+)
G137754 NA non-coding upstream 851618 21798503 ~ 21813863 (+)
G137951 LOC100846954,LOC107575789 non-coding downstream 251845 22921189 ~ 22922372 (+)
G137984 NA non-coding downstream 388742 23058086 ~ 23058391 (+)
G138010 NA non-coding downstream 493647 23162991 ~ 23163619 (+)
G138034 NA non-coding downstream 606320 23275664 ~ 23275950 (+)
G138042 NA non-coding downstream 1129262 23798606 ~ 23843211 (+)
G137899 NA other upstream 99375 22565424 ~ 22566106 (+)
G137775 NA other upstream 707323 21932295 ~ 21958158 (+)
G137764 NA other upstream 788939 21854706 ~ 21876542 (+)
G137629 NA other upstream 1333411 21270360 ~ 21332070 (+)
G137947 NA other downstream 148609 22817953 ~ 22818458 (+)
AMCG00012579 NA other downstream 211015 22880359 ~ 22911656 (+)
AMCG00012593 NA other downstream 1028080 23697424 ~ 23742591 (+)

Expression


Co-expression Network