AMCG00012578


Basic Information

Item Value
gene id AMCG00012578
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22961198 ~ 22966195 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012578
GTATGATAGAAGATGCTCCAATCGAACAAATCCCCACAGTTTCTGTGACCGAAAATGAGAAAACTACATTATATTGCAAGTTTGAAGCATCAAGCAGTGATTATCTCTTTAGGTACATACAGAAAAGCAACAAGGCACCAAAACATATACTTGGACAGTACTCTGGTATTGACCCAGGATTTAAAGGTTTCTCTGCAAATCGCAACAACCAGGAGAATACCTATAATCTGACTAtatctgcagctgtgctgtCGGACTCTTCCACATACTTCTGTGCTCTGAGGCCCACAATATCTTCTGGGCTGAGTGATGGAGATGAGGTGCATCCATGGAAACATGTCCAAACATCTGAGGAGACCCAGGAGACCAGAATCTACTGTAATTACTCTCTGACAAACAATGCAGCCTCCAAATATCTATACTGGTACCAGCAGAAAGCCATGAACAATCCAAGATATATTCTTCAGCTGTACGAAGCAAGCAGTAATGCTAATTTGATTAGATCTGAAGAATTTGATGGGAGATATACAGGACATTTGAATACTTCACCAAGGATCACTTATTTGTCAATCACAAATACACAGTTGTCTGACTCTGCATTTTACTATTGTGCTTTGAGTTCCACAATAATACTGAGCAAAGTGCAGCTGCTCACAAAAACCTCTGAGCATGGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012578 True 677 mRNA 0.40 3 22961198 22966195

Neighbor

gene id symbol gene type direction distance location
AMCG00012580 NA coding upstream 10298 22936270 ~ 22950900 (+)
AMCG00012581 NA coding upstream 98375 22860079 ~ 22862823 (+)
AMCG00012576 NA coding upstream 291854 22665481 ~ 22669344 (+)
AMCG00012577 NA coding upstream 372993 22585701 ~ 22588205 (+)
AMCG00012571 NA coding upstream 505637 22452135 ~ 22455561 (+)
AMCG00012583 NA coding downstream 76293 23042488 ~ 23092426 (+)
AMCG00012585 NA coding downstream 220692 23186887 ~ 23230915 (+)
AMCG00012586 NA coding downstream 451406 23417601 ~ 23422278 (+)
AMCG00012588 NA coding downstream 519423 23485618 ~ 23516382 (+)
AMCG00012589 NA coding downstream 587865 23554060 ~ 23561816 (+)
G137951 LOC100846954,LOC107575789 non-coding upstream 38826 22921189 ~ 22922372 (+)
G137851 NA non-coding upstream 634848 22308413 ~ 22326350 (+)
G137827 NA non-coding upstream 884328 22075843 ~ 22076870 (+)
G137814 NA non-coding upstream 955520 22005381 ~ 22005678 (+)
G137761 NA non-coding upstream 1002844 21836242 ~ 21958354 (+)
G137984 NA non-coding downstream 91891 23058086 ~ 23058391 (+)
G138010 NA non-coding downstream 196796 23162991 ~ 23163619 (+)
G138034 NA non-coding downstream 309469 23275664 ~ 23275950 (+)
G138042 NA non-coding downstream 832411 23798606 ~ 23843211 (+)
G138118 NA non-coding downstream 953881 23920076 ~ 23921869 (+)
AMCG00012579 NA other upstream 49542 22880359 ~ 22911656 (+)
G137947 NA other upstream 142740 22817953 ~ 22818458 (+)
G137899 NA other upstream 395092 22565424 ~ 22566106 (+)
G137775 NA other upstream 1003040 21932295 ~ 21958158 (+)
G137764 NA other upstream 1084656 21854706 ~ 21876542 (+)
AMCG00012593 NA other downstream 731229 23697424 ~ 23742591 (+)

Expression


Co-expression Network