AMCG00012586


Basic Information

Item Value
gene id AMCG00012586
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23417601 ~ 23422278 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012586
ATGACAAGTAATTTCTCTGACTCTCAGGTATTTCAGGATCAAAGCATTGCCATCTCTGAGGGTGGCAACACAGAACTGTTATGCAGTCAAAATATTACCACTGACGACCCATTGTTTTGGTATATACAGCGACCGAATCAATCACCGCAGATTCTAGTTCATTCGTATAATAAAAAAGTTGTAATTGCACGTTTCACAATGGAGATAAGCGacaaaggaaggaaaacaaCACTTGCAATACAGAAGGTTGATTTGAGAGACAGTGCTTCTTACATCTGTGCAGTGAGGCCCACAGCTGTTCAATACCAATGCAGGCTGAACAAAAACCTTAGAAAGGACCCAACTCTGGTACTGTAG

Function

GO: NA

KEGG:

id description
ko04640 Hematopoietic cell lineage
ko04660 T cell receptor signaling pathway
ko04658 Th1 and Th2 cell differentiation
ko04659 Th17 cell differentiation
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012586 True 357 mRNA 0.41 2 23417601 23422278

Neighbor

gene id symbol gene type direction distance location
AMCG00012585 NA coding upstream 186686 23186887 ~ 23230915 (+)
AMCG00012583 NA coding upstream 325175 23042488 ~ 23092426 (+)
AMCG00012578 NA coding upstream 451406 22961198 ~ 22966195 (+)
AMCG00012580 NA coding upstream 466701 22936270 ~ 22950900 (+)
AMCG00012581 NA coding upstream 554778 22860079 ~ 22862823 (+)
AMCG00012588 NA coding downstream 63340 23485618 ~ 23516382 (+)
AMCG00012589 NA coding downstream 131782 23554060 ~ 23561816 (+)
AMCG00012591 NA coding downstream 206182 23628460 ~ 23649841 (+)
AMCG00012592 NA coding downstream 240950 23663228 ~ 23689541 (+)
AMCG00012595 NA coding downstream 437551 23859829 ~ 23899337 (+)
G138034 NA non-coding upstream 141651 23275664 ~ 23275950 (+)
G138010 NA non-coding upstream 253982 23162991 ~ 23163619 (+)
G137984 NA non-coding upstream 359210 23058086 ~ 23058391 (+)
G137951 LOC100846954,LOC107575789 non-coding upstream 495229 22921189 ~ 22922372 (+)
G137851 NA non-coding upstream 1091251 22308413 ~ 22326350 (+)
G138042 NA non-coding downstream 376328 23798606 ~ 23843211 (+)
G138118 NA non-coding downstream 497798 23920076 ~ 23921869 (+)
G138209 NA non-coding downstream 814384 24236662 ~ 24236977 (+)
G138212 NA non-coding downstream 818861 24241139 ~ 24241424 (+)
AMCG00012579 NA other upstream 505945 22880359 ~ 22911656 (+)
G137947 NA other upstream 599143 22817953 ~ 22818458 (+)
G137899 NA other upstream 851495 22565424 ~ 22566106 (+)
G137775 NA other upstream 1459443 21932295 ~ 21958158 (+)
G137764 NA other upstream 1541059 21854706 ~ 21876542 (+)
AMCG00012593 NA other downstream 275146 23697424 ~ 23742591 (+)

Expression


Co-expression Network