AMCG00012593


Basic Information

Item Value
gene id AMCG00012593
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23697424 ~ 23742591 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012593
TATGTCACTGGGAACTCTGTTTCACAGCCTGCGGAGACTGTAATTGAGGAACGGAATACTATTCAAATTCAATGCAAATATACAACGAATAtctcacagtttgccattgacTGGTATAGATATGATGCCTATCGTGCACCTCAGTTTCTTATTCGGAAGTATTGGAATAATAATGAATGGAAAGCAGACAGTTTAGACCCACGTTTCACAATAAAGTTGAATACTCAACTCACATCCACAATGCTAAATATTGCAAACGCAAGACTGTCGGATGCAAGCACTTATTTTTGTACCATCAGTGACTCACAGTGTCGAGCCTCAATGATTGATGCTGCAGTTGTACCCCTCATGACTGATGATGATCTTGCCAAATACATTCCCTCTGATGatgTGAAATCGGATTCAGTAATCAACCAAACTCCTCCATCTACCAGCGTATTTGAACTTGAGGCTGTTACTTTCCATTGTAACCTGAAAAACGGACCAATGAGCAACCACTATATGTTTTGGTACAGACAAAGTCAGAAGCAGTCTCTCGATTTAGTTTACTCAGAAGACGGGAACATATATGGAAAAGCATTTCGACAAAGATTCATCGCAAATGTGGAGAGCTCAGGGAACAAATTTTCCTTGCAGATCAAAAGCGTTGTGTTGGAAGACAGCGCCCTTTACTTTTGCGGAGCTCGACCACATACTCGTGTGTTTCTCTTGACTCCTGATTCCCTCATGGCTCATGCAAGTTTCCACACTCGACATTCCAGCTCCATGACCTTCAACTTCAAGGCTTCAAGGATCACAAGTCCTGACGTGGTAGGTGTGGAATCGAATCCAAACATCATCCAGACTCCTCCAACCGCCAACCTTGGAGAACGTGAAAGTGTAACTTTCCATTGTAACCTAGAAGATGGGGAAATGGGCAGTTATTATATGTATTGGTACAGACAGCATCAGAGTCGGGCTCCCGAATTCATATACAGAGAAGGCGATCACTATGGGCAAGGATTTGGAGAGAGGTTCGTGGCAAAACTTGAGAGCTCAAACAACAAGTTCTCACTGCATATTAAAAACGCTCTGATCGAAGACAGTGCGATATACTATTGCGCTGCCAGAGCACTGTGTCTGAATTACTGGGGGCTACAATAC
>TU173653
aaaaaaGCGGAAGAGCAgtactttttcttctttaaactgCAACACATGAACTGAGGAAGAAACATGCATCTACTTCTGATGTTTATAGCAGTATTCCAGTGTAATGAATTagGTGTGGAATCGAATCCAAACATCATCCAGACTCCTCCAACCGCCAACCTTGGAGAACGTGAAAGTGTAACTTTCCATTGTAACCTAGAAGATGGGGAAATGGGCAGTTATTATATGTATTGGTACAGACAGCATCAGAGTCGGGCTCCCGAATTCATATACAGAGAAGGCGATCACTATGGGCAAGGATTTGGAGAGAGGTTCGTGGCAAAACTTGAGAGCTCAAACAACAAGTTCTCACTGCATATTAAAAACGCTCTGATCGAAGACAGTGCGATATACTATTGCGCTGCCAGGGTATACGGTGACACCCTACCGTTAATTTTTGGAAAAGGGATCGCATTATACATAAATCCAA

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012593 True 1143 mRNA 0.43 5 23697424 23710070
TU173653 False 469 TUCP 0.42 3 23709518 23742591

Neighbor

gene id symbol gene type direction distance location
AMCG00012592 NA coding upstream 7883 23663228 ~ 23689541 (+)
AMCG00012591 NA coding upstream 47583 23628460 ~ 23649841 (+)
AMCG00012589 NA coding upstream 135608 23554060 ~ 23561816 (+)
AMCG00012588 NA coding upstream 181042 23485618 ~ 23516382 (+)
AMCG00012586 NA coding upstream 275146 23417601 ~ 23422278 (+)
AMCG00012595 NA coding downstream 117238 23859829 ~ 23899337 (+)
AMCG00012596 NA coding downstream 209601 23952192 ~ 23976569 (+)
AMCG00012599 NA coding downstream 301364 24043955 ~ 24069451 (+)
AMCG00012598 NA coding downstream 473776 24216367 ~ 24222350 (+)
G138034 NA non-coding upstream 421474 23275664 ~ 23275950 (+)
G138010 NA non-coding upstream 533805 23162991 ~ 23163619 (+)
G137984 NA non-coding upstream 639033 23058086 ~ 23058391 (+)
G137951 LOC100846954,LOC107575789 non-coding upstream 775052 22921189 ~ 22922372 (+)
G137851 NA non-coding upstream 1371074 22308413 ~ 22326350 (+)
G138042 NA non-coding downstream 56015 23798606 ~ 23843211 (+)
G138118 NA non-coding downstream 177485 23920076 ~ 23921869 (+)
G138209 NA non-coding downstream 494071 24236662 ~ 24236977 (+)
G138212 NA non-coding downstream 498548 24241139 ~ 24241424 (+)
AMCG00012579 NA other upstream 785768 22880359 ~ 22911656 (+)
G137947 NA other upstream 878966 22817953 ~ 22818458 (+)
G137899 NA other upstream 1131318 22565424 ~ 22566106 (+)
G137775 NA other upstream 1739266 21932295 ~ 21958158 (+)
G137764 NA other upstream 1820882 21854706 ~ 21876542 (+)

Expression


Co-expression Network