AMCG00012595


Basic Information

Item Value
gene id AMCG00012595
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23859829 ~ 23899337 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012595
ATGAATGAAGAAAAGCTGGGAACAACAGGCATCTTTCACATAGAACATACAGGGGAGttggagggagaggaagagataGTGCAGGAGAGAATTCAGTCTGAAAGGAGTGAGCTGGAAGAAGTAGAGGGAGAGCAGGAAGATGAAGCTGAGATAGAGGGAGGTGAAGATAaggcagagggagagattgAAGTGCAGCAGAGTGAGGATGAGGGCATCAAGGGCGCACTTGACAGAAGTCCTCACAGAGCAGTAGAAGAAGACCTTTCTCGACCTGTGGAAACTACTTTGAGTGACCCTGAGAGAGTGTTGGTTCACATACAGTTGACATAGTGAAGACAAACTGGAACTTACTGAGCAGCACAGGAACGTTCAAAATAGGATATTATTGATCACCAGGAAGAGCCAGAGACGGGATACACCATGATCTGTAAATGTTACAAAGGGActcaatatatacaaatctgATCCTGCCAAGACTCTGTACACTACTGATTTCACAGaatagacttttttttgttccattcTAGAAGGGTTTGCCGATGGAGATGGAACATTCTTAAATACAATCTGAACTTGACATAGATGGACTGAAATAAATCTGCTCTGGTGTGTAACCAAATTTTACAAGACATGAGTGAACTAGATGTAATAAAATCAGAAGAGGACTTTCACCCTGTTGACACTGAAGTTCAGTGCTCTGATGAAATAAAGATTGAGCCCATGCTAGGCCCTGATCACATGAAATCTGATACATGTGCAAGCGAGGTCGTTACTGTTTCGCATGTGGGAATGAAGGAATCTAAAGAAAGTGATGTTGGACTTTGTCAGAGTGCAGTGAAAGCTTCCACATCACTCACTCCGCAACCTCCAGGACCCTCTTACACACTCACTCCCACTTCATTGCTTGTGAGTGCCAATACAGCAGTGTCTGCTTTACACACGCAGACATGCCAATCAATTATAGTGCCCCAAAATCCATTCCTCCTGCTCAAATATCAAGGAGATGGTACATACCACTTTACCCCCAGTGGGAGTGCAACACACCAACTGACTGACATGTTAAGTACACTTAAAAACCATCAAGAAATTAACTCGGATGTGAGGCCGTACAGCTGTCGACAGTGTGGGGAGGCTTTCAGTCAGGAAACGGGACTTAAATCTCATGAGCGAACTCACACTGGATGGAGAACACATTGCTGTTCCTATTGTGAGAAGACATTCCGTCGTACAGACAGTCTTAAAGTTCATGAGCggattcacacaggagagagaccattcaGCTGTAGTGAATGTTCTAAGACTTTTAGGGATTCTAAAAGTCTTAAGTCACATGAGCTTATCCATACAGGAGAAACTCCGCACCAGTGCTCCCAGTGTGGAAAGTCTTTCAGTGCAGcaaataatcttaaaatacaCATGCAAGTTCACACAGATGTAAGACCATTCTGCTGTTCCCAGTGTGGCATTGCTTTCAAATTTTCATCAAAGCTTAAAAGACATCAACTTATTCATACTGGAGAGAAACCATTCAGCTGCTCCCATTGTGGAATGAGTTTTCAAAGATCAAGTGGccttaaaaaacacagactGGTTCATGCGGAAGATGGAAGCTACGGCTGCTTCCAGTGTGGGGAGACTTTCAGTGATTTAAGTAGTCTTACAAGCCACAAGACAATTCACATAGGAGAGGCACAACCGTATTGCTGCTCCCACTGTGGGAGAACCTTCAAAACAACAGTAACTCTTAAAAACCATGAGCaaactcacacaggagagaaaccacaTGGCTGCCACCATTGTGGGAAGACTTTCAACAGGTTAGATCATCTTAAAGCACATGAAAGAGTTCATACAGGGGAGAAACCATACTGCTGCCACCAGTGTGGGAAGACTTTTGTTCAGTCAGGAGGTCTTAAAGAACATGAGAGAGTTCATACAGGGGAGAAACCATTCTCGTGTTCCGTGTGTGGGAAATCTTTCCGTCATTCACGTACTTTCCAAATACACAAGAATACTCACACCGGAGAAAAGCCATACTCTTGCTTCCAATGTGGAAAGACGTTCGGTGATCATGGATCTCGTAAACGACATGAGcgaattcacacaggagagaaaccattcTGTTGCCCCCCATGTGGGAAGGCTTTCAAGACAACAGCGGAACTTAGAATACACCAATTAATTCACTCAGGAGATAGACCATACAGTTGCTCTCAGTGTGGGAAGACTTTTAGTTTGGAAACGCGTCTTAAAACACATCAGAGACGGCACAAAAAACCATAATAAATGTACTACTTTCACTATGAGAAAAGTTCCAAACTATAGTTTCACTGTCAAAAATGTATGAGATCCACACACCACAGAAACTGTACTTTTAACTGTGGAATAAATCTTGAAGAACATGGGACAATTCATACAGCAGAAAGACCCCAGTGTTTCAACTTGTgtttaaagaatgaaagaatgTCAGTGAGGTAGAAAACTTTTGTAAAAGCCAAAATGTCATTGTCTGAGGATACAACACTTCCACTGGTCACTAATACAGGATTGATGATTTTTATCCATGATTTGAATGTCTTCTGAAGGGCTAGATTAACCATCATAAGAGCGGGAGGGCATTTAGAATGAGTCATTCCCCActttttacattgattttgaGCACCAGAGTGTCATAACAGTCAAAGTCTCTGCATGCTACATTATTACAGGAGAGCGAACAGGTCTCATATCTCACCCCTGCCATTGTTGACGTTGGGCGGGACCTCTTAGTGAGGCACAAACTTAGTGCCACTGAGGGAGGGTGGATACAAGCCACTGATTCATGTGATAGACTGGCAGCTGACATGAAGGGCTTCTATTGCTTTGTCTCTTCTTTCCTAAGGAAGCATGGGGGTTGTAGTGGTGAACCAAGTTGAATATTTCACAAGTGGGGAAAAATAATTGGAGAATCTATTAAATTATAAAGCAAGAAATGTATGTTGGCTTTTACATTTCATGAAGAAAAACTTAAATTTGAGTGGTGCATATCAtttcaaattagatttttgaagtaaaaatgtaatattagccaaataaaattcagtttttttttttcttaattaccTTTTTGTTGAGGAATTTAGGATTTGGGTGAGAGAGCAGGAAGAAAGTCTATTATTTGggattagggagcagacacGAATGAGATAATGGCTGaagaaacaaactttttttataCATGCTTGGACTTGCATTTGAATTATGATTTGGGTGGGTATGTCCATTTcttaaggttttgttttcagatggGAACCTGTCAATAAGTATAATTGGGCTCAAAAAGGagccagttttattttgttttttatttcactacCCTCATGAAGTAATAAATCACTTCCTTTGCACCATATTTCTCGACTGTTTATGTCTGTCTTCCAAGATCCTCCCTAATTATGGAGCCCAGCCCTGTGGCCATCCCACAGTCACActgtattgaaaatgtgtaatatggGGATGCGTTTCCAGTCCTGACAACTTACAATTTCATACTGtaataaactattttaacatAAAA

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012595 True 3556 mRNA 0.41 3 23859829 23899337

Neighbor

gene id symbol gene type direction distance location
AMCG00012592 NA coding upstream 170288 23663228 ~ 23689541 (+)
AMCG00012591 NA coding upstream 209988 23628460 ~ 23649841 (+)
AMCG00012589 NA coding upstream 298013 23554060 ~ 23561816 (+)
AMCG00012588 NA coding upstream 343447 23485618 ~ 23516382 (+)
AMCG00012586 NA coding upstream 437551 23417601 ~ 23422278 (+)
AMCG00012596 NA coding downstream 52855 23952192 ~ 23976569 (+)
AMCG00012599 NA coding downstream 144618 24043955 ~ 24069451 (+)
AMCG00012598 NA coding downstream 317030 24216367 ~ 24222350 (+)
G138042 NA non-coding upstream 16618 23798606 ~ 23843211 (+)
G138034 NA non-coding upstream 583879 23275664 ~ 23275950 (+)
G138010 NA non-coding upstream 696210 23162991 ~ 23163619 (+)
G137984 NA non-coding upstream 801438 23058086 ~ 23058391 (+)
G137951 LOC100846954,LOC107575789 non-coding upstream 937457 22921189 ~ 22922372 (+)
G138118 NA non-coding downstream 20739 23920076 ~ 23921869 (+)
G138209 NA non-coding downstream 337325 24236662 ~ 24236977 (+)
G138212 NA non-coding downstream 341802 24241139 ~ 24241424 (+)
AMCG00012593 NA other upstream 117238 23697424 ~ 23742591 (+)
AMCG00012579 NA other upstream 948173 22880359 ~ 22911656 (+)
G137947 NA other upstream 1041371 22817953 ~ 22818458 (+)
G137899 NA other upstream 1293723 22565424 ~ 22566106 (+)
G137775 NA other upstream 1901671 21932295 ~ 21958158 (+)

Expression


Co-expression Network