G131426


Basic Information

Item Value
gene id G131426
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 461410 ~ 462697 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU164765
AGACTGAGAGGAGAGCCAGTGAGATCAGAGAGTCAGTGATACAGACTGAGAGGAAAGCCAGTGAGATCAGAGAGTCAGAGATACAAACTGAGAGGAGAGCCAGTGAGATCAGAGAGTCAGTGATACAGACTGAGAGGAGAGCCAGTGAGATCAGAGTCAGTGATACAGACTGAGAGGAGAGCCAGTGAGATCAGAGAGTCAGTGATACAGACTGAGAGGAGAGCCAGTGAGATCAGAGTCAGTGATACAGACTGAGAGGAGAGCCAGTGAGATCAGAGTCAGTGATACAGCATTAATCAGACTCACTCTTGGGAGGGTTGAACTCCAGGCTGCTCCTCCTCTTGACAGGTCGTGTGGattcctctgtctctttctccagCTCCTCTTCCTTCAGTGTCTTTCTCAtcttctccttcagctcctcTTCTCTCCTGCTCCACTCCTCCTCCATCCTCTGTTTCagctcctcctctctctctctctccttcacctTACACTCCTTTCTGATCTgatccatctctctttctctctcccctaaTCTTTGTGTCAGCTctgctatctctctctctctcatttcatctttctttataatctctctctctctctcttcctctctctgctcaTACCTCTGTTTCAGgtcttccatctctctcttcctctcctcatCTCTCTGTTTCAATTCTttaatgtctctctctttctgttcctCCCTCTCTTTTATCTCCCACTGaatcttcctctctctctcctcaaacTCCCTTTTTAGCAGATCTATtgctctctgcctctctttctcattctctctgagttccctctctctttctctctccctctcctcctccctctgttttacctcctccctctccctttccatCTCGTCATCCCTCTTTTTCAACTGCTCTTcaatctctctccttctctcctgtgCCTTCCTTtgctcctcttctctctctctcttttcaaatTGTTGTGTCAGATctgctatctctctctccctctctttgtcCTTCTGTTTCAGgttttcaatctctctctcccttacCTTATACTCCTTATTTAACTCATCTATCTCTGTCTTcatctcctctttctctctgatctccctctctctcatctcctctctctctttatccatctgtctctctctctccccaaatCTTTGTGTCAGCTCtgccatctctctcttcctctcctcatCTCTCTGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164765 True 1208 lncRNA 0.47 2 461410 462697

Neighbor

gene id symbol gene type direction distance location
AMCG00011590 NA coding downstream 87220 373364 ~ 374190 (-)
AMCG00011588 NA coding downstream 140782 314019 ~ 320628 (-)
AMCG00011584 NA coding downstream 179269 280931 ~ 282141 (-)
AMCG00011582 NA coding downstream 193356 262391 ~ 268054 (-)
AMCG00011583 NA coding downstream 200819 254881 ~ 260591 (-)
AMCG00011594 NA coding upstream 150443 613140 ~ 619539 (-)
AMCG00011595 NA coding upstream 192723 655420 ~ 656305 (-)
AMCG00011599 NA coding upstream 224434 687131 ~ 691008 (-)
AMCG00011598 NA coding upstream 260387 723084 ~ 731850 (-)
AMCG00011602 NA coding upstream 497409 960106 ~ 965129 (-)
G131244 NA non-coding downstream 100807 360230 ~ 360603 (-)
G131152 NA non-coding downstream 363581 96783 ~ 97829 (-)
G131149 NA non-coding downstream 396181 64893 ~ 65229 (-)
G131114 NA non-coding downstream 401313 53722 ~ 60097 (-)
G131428 NA non-coding upstream 87342 550039 ~ 560333 (-)
G131437 NA non-coding upstream 164634 627331 ~ 630425 (-)
G131460 NA non-coding upstream 231235 693932 ~ 698388 (-)
G131471 NA non-coding upstream 311480 774177 ~ 837898 (-)
G131477 NA non-coding upstream 385373 848070 ~ 854045 (-)
G131420 NA other downstream 46256 414517 ~ 415154 (-)
AMCG00011589 LOC100196315,LOC108414592,LOC106511660 other downstream 157495 293452 ~ 303915 (-)
AMCG00011579 NA other downstream 248848 165892 ~ 212562 (-)
G131456 NA other upstream 202680 665377 ~ 667310 (-)
AMCG00011597 mink1,LOC103395422,LOC107746403,LOC107596107 other upstream 237121 699818 ~ 720407 (-)
AMCG00011601 NA other upstream 327311 790008 ~ 810157 (-)
AMCG00011603 NA other upstream 536294 998991 ~ 1006137 (-)
AMCG00011640 NA other upstream 1223612 1686309 ~ 1704999 (-)

Expression


Co-expression Network