G131508


Basic Information

Item Value
gene id G131508
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 1097270 ~ 1098796 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU164903
agagagagagagagagagagagagagagagagagagagagagagaaagaaatggcAGCAACCTTTGTGAAAAAGTGCAAGGGTTCAAAACAACTACAAACAGAGCAAAAATGTCAACAAACTGTAATGTACAAGCGAAAGATACAATGGTTgcattactactaataatgatattgatgttgatacagaagaatggaaaaataactACTTTTATTTGTCTTCACAGGGGCCAGTAACAATGACTCTCTCTCACATTCATCCCACAGGTCCCCTACCCAAAAGCCACGACACATCAAACTGCATATTCTCCCCTCTCACATTGGCCTCTCTGTGGTGCGGCCCACACACCATCCTCATGAGCACTGATACCAGCGCCAGTGTGGACGGACAGGAGGGGGGGTGCTGGAAAACCATATtatgGAAAATTGGAGAAGGGCCTGAAGACATTGTTAATATGAAAAACGGATACATTGAGACAGGAATTGCTGTTTATGACAAATATTACAGCAAGTGGAAACATGAACAGTCATACAATGTCAACCTGCTTTAAATCCAAGCACAGCTGAAGGACACAGAGTCTGGTGGGACTATGGACATTTCATTAACCGTCCTTTCCATCACTGACTCTGGATGGACAGAGTGAAAAGCTTTGCTGTGGACTACTAGACTCAAGGAACTGTGCTGCTTGGTTGTTTGACTGAAATGGAAAACGAAAGGCAATGTTTCAATGGAACTATAAGTGGtgaacaaagttgttgtgttaaaatatatctcCACAAGGCAAACTGTTGATGGTTTACACAACATCATGATAGTATTACTATGGGAACTTTTGAAGTATTTATGTTGGAATATTATGAACCCTTGGTAATATAATCCAGTATAAAGCCAGTGCTTTGTAATGATCAGAAAATGCAGATCTGCTCTAGTTTAAGATGCATACAATGCTACATAGTGCTAAACACAAAGAAGTCTATTGAGAGATAGTGGTGGCCTTTGGACAGTGCCAATGTGGTTCTGAATGGGAAATTATAAATGATAATGCTTGTACTGAGTACACATGCACAGCAATCATCACAAGGTTTAGGTTTTGCAGAATAAGGATGGAATTATGtcattcataattaaaacacaaatacaagtcATGCAGATGTTTGGAAATATgagatgggggaaaaaaattgaCTCAAacttatattgtaatatatcttAATGATATAAtgaaaattatttcaaatgtatgccTATGATGGTTAATTGGAAAAGATGAACTGATTAATAACTGTCATCACTAACCCAATAACTATATTGTTGAAGGAGCTTCTATAATAAATActattgtaggtgctttcggcagtggacaggggtcagcatgggcaccctgactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164903 True 1387 lncRNA 0.39 2 1097270 1098796

Neighbor

gene id symbol gene type direction distance location
AMCG00011602 NA coding downstream 132141 960106 ~ 965129 (-)
AMCG00011598 NA coding downstream 365420 723084 ~ 731850 (-)
AMCG00011599 NA coding downstream 406262 687131 ~ 691008 (-)
AMCG00011595 NA coding downstream 440965 655420 ~ 656305 (-)
AMCG00011594 NA coding downstream 477731 613140 ~ 619539 (-)
AMCG00011611 NA coding upstream 53630 1152426 ~ 1154789 (-)
AMCG00011608 NA coding upstream 65972 1164768 ~ 1176860 (-)
AMCG00011610 NA coding upstream 80004 1178800 ~ 1180631 (-)
AMCG00011609 NA coding upstream 82222 1181018 ~ 1184531 (-)
AMCG00011614 NA coding upstream 96103 1194899 ~ 1202106 (-)
G131475 NA non-coding downstream 153369 890283 ~ 943901 (-)
G131477 NA non-coding downstream 243225 848070 ~ 854045 (-)
G131471 NA non-coding downstream 259372 774177 ~ 837898 (-)
G131460 NA non-coding downstream 398882 693932 ~ 698388 (-)
G131437 NA non-coding downstream 466845 627331 ~ 630425 (-)
G131546 NA non-coding upstream 296897 1395693 ~ 1396352 (-)
G131604 NA non-coding upstream 507256 1606052 ~ 1606285 (-)
G131615 NA non-coding upstream 532661 1631457 ~ 1631760 (-)
G131625 NA non-coding upstream 544009 1642805 ~ 1643028 (-)
G131633 NA non-coding upstream 567758 1666554 ~ 1668680 (-)
AMCG00011603 NA other downstream 91133 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 287113 790008 ~ 810157 (-)
AMCG00011597 mink1,LOC103395422,LOC107746403,LOC107596107 other downstream 376863 699818 ~ 720407 (-)
G131456 NA other downstream 429960 665377 ~ 667310 (-)
G131420 NA other downstream 682116 414517 ~ 415154 (-)
AMCG00011640 NA other upstream 587513 1686309 ~ 1704999 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other upstream 608921 1707717 ~ 1719226 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other upstream 751103 1849899 ~ 1864772 (-)
G131863 NA other upstream 1194837 2293633 ~ 2296453 (-)
G132117 NA other upstream 1362311 2461107 ~ 2461750 (-)

Expression


Co-expression Network