G131756


Basic Information

Item Value
gene id G131756
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2000409 ~ 2002192 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165243
CTGATGATGATGGCCGGCATGTTGGTGGCCTGCATCGCCGCAACGAAGGACAGAGGGGTGACTGGGGACAGCAGGATGGCCACCAGAGAGAAATACAGGACAAGGAACGCcagacctgagagagacagtgtgtgtgagagagagaggacacattgccagacaggcagacagacaggcagaggtagagagagaaaaacagagacacagagatagacactgacagacagacagacagcaacacacacagacagacagacagacatagagagacacagacagacagacggagagagagaaaaacagaggcagacacagagacagatggagagagagacagagacagacagcaacacacacagacagacagacagacatagagagacacagacagacagacggagagagagaaaaacagaggcagacacagagacagatggagagagagacagagacagacagcaacacacacagacagacagacagacatagagagacacagacagacagacggagagagagaaaaacagaggcagacacagagacagatggagagagagacagagacagacagcaacacacacagacagacagagagaaagagagagacagacagagagagacacattgacagacagacagacagacaggggtcCCAGTCTCACAGGCCGGGCTGGCGGGGGGGTTCTGGTTCTTGTTGGGGGTCTCGGCTGGCCTCACCTCTCAGGCTGCTGCCCCTGTAGTGCTGGATCAGGAAGCCGATGGCCACCGTCTGGATCATCAGGAACAGGGCCTCCCCCCAGGCACTGCAGGGCCACGAGCAGAGacgctcagacacacacacacaaacacacacacctgacactcacacgcacacacacctacCTGACGCTTactcacacacacctacacacgtacacacacctgacacacatctgacactcactcacacacacctgacactctctctctctcacacacacacacacacggatacCTTGCACTAACACACACTCCCCAGCTGCAgtcagacagaaaaataaatgatgataattatgATCATAATGCTATGGAGCCCAAAAGGAAGCCGGAAAGACAGCCCTGAGGGAGAATCGACAGCGCATGGAAAGAGCACCAGTCAGGAGCCGGAACTGTGCCAGATTGAAATGAATCAGCAGCGCCGGTACCTGAACGGGAAGCTGTGTGCGATGCTGTAGGCCATGGTGCCAGTGATGgccagcagctccagcaggaCGGCACCGAAACTCAGCCCCTCGGCACTGCCAGCGCCCACCAGCTTAAACACCTGCGGCAgcttcactgagagagaggggtgcgagagggaggggtgagagaggaagaagagagagagaggggagaaagagGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165243 True 1384 lncRNA 0.54 2 2000409 2002192

Neighbor

gene id symbol gene type direction distance location
AMCG00011657 NA coding downstream 17323 1979158 ~ 1983086 (-)
AMCG00011660 NA coding downstream 59897 1936735 ~ 1940512 (-)
AMCG00011659 NA coding downstream 84563 1911644 ~ 1915846 (-)
AMCG00011658 NA coding downstream 95591 1902372 ~ 1904818 (-)
AMCG00011649 NA coding downstream 125173 1873505 ~ 1875236 (-)
AMCG00011666 LOC107750560,LOC106608953,LOC107561748,LOC104962535,LOC105895561,LOC105027200 coding upstream 20516 2022708 ~ 2031267 (-)
AMCG00011667 NA coding upstream 49819 2052011 ~ 2053551 (-)
AMCG00011673 NA coding upstream 95456 2097648 ~ 2116839 (-)
AMCG00011672 acadvl,LOC107738021,LOC107595296,LOC107731915,LOC107597078 coding upstream 152887 2155079 ~ 2180288 (-)
AMCG00011678 dvl2,LOC102202272 coding upstream 186061 2188253 ~ 2196227 (-)
G131751 NA non-coding downstream 51470 1947447 ~ 1948939 (-)
G131741 NA non-coding downstream 84859 1900593 ~ 1915550 (-)
G131709 NA non-coding downstream 121118 1866793 ~ 1879291 (-)
G131691 NA non-coding downstream 154688 1775489 ~ 1845721 (-)
G131633 NA non-coding downstream 331729 1666554 ~ 1668680 (-)
G131833 NA non-coding upstream 56587 2058779 ~ 2059607 (-)
G131871 NA non-coding upstream 232420 2234612 ~ 2236805 (-)
G131873 NA non-coding upstream 244579 2246771 ~ 2247129 (-)
G131884 NA non-coding upstream 276041 2278233 ~ 2278516 (-)
G131864 NA non-coding upstream 284677 2286869 ~ 2298484 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 135637 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 281183 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 295410 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 994272 998991 ~ 1006137 (-)
AMCG00011601 NA other downstream 1190252 790008 ~ 810157 (-)
G131863 NA other upstream 291441 2293633 ~ 2296453 (-)
G132117 NA other upstream 458915 2461107 ~ 2461750 (-)
G132140 NA other upstream 564553 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 607536 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 640471 2642663 ~ 2643456 (-)

Expression


Co-expression Network