G131909


Basic Information

Item Value
gene id G131909
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2327127 ~ 2327708 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165433
ATTTCCATTCAATACCGCTATTGTCATCTGTTACCTTTCAATTCCAAACCGTTCccccagaggctgctgggaaaTGACCTTCACCCCAGAAACACTGAATGATTGGCCCCTGCTGTCCGTCACTGGGCCCGGCTCCTGCCCCAGCTCAAGCACACGGCACTGGGGAACAACGCCCTCTGTGCCTTTTCAACGCCACACGGAGAGCCTCATCGCTTCTGTGTGCTCAGCTCTACACGCGtgatgtatatacatattacaaCATGTACATATTGTTGCCATTATGTCTATCAGGGGAGTCCAGCCCTGGTCcaggagagcccctatccagcaggttgcACAGGTCTCTCTCGTATCACCAATTtaaaacacctggaagtatttcagtctGATCAGTGAAGCAGGTGGTTtaaattcagtcctttagaaactagtggagcaattatctgaatacctgcagcctcctgagGGCAGAGGTCCCTGggttgacttgcttaattgattaattactcacatgtgttcccagtgttTAGAAATTTGTGATTGAGGGTGACCTGTAAGATCAaatggattggggctctccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165433 True 582 lncRNA 0.49 1 2327127 2327708

Neighbor

gene id symbol gene type direction distance location
AMCG00011692 NA coding downstream 9539 2313629 ~ 2317588 (-)
AMCG00011683 NA coding downstream 54321 2268583 ~ 2272806 (-)
AMCG00011682 NA coding downstream 58938 2267971 ~ 2268189 (-)
AMCG00011677 NA coding downstream 88609 2236917 ~ 2238518 (-)
AMCG00011680 NA coding downstream 96054 2226336 ~ 2231073 (-)
AMCG00011690 NA coding upstream 8957 2336665 ~ 2337853 (-)
AMCG00011693 NA coding upstream 27971 2355679 ~ 2358344 (-)
AMCG00011691 NA coding upstream 34496 2362204 ~ 2365994 (-)
AMCG00011697 eif5a,LOC107691471 coding upstream 59904 2387612 ~ 2393372 (-)
AMCG00011698 NA coding upstream 76263 2403971 ~ 2416596 (-)
G131905 NA non-coding downstream 7129 2317940 ~ 2319998 (-)
G131864 NA non-coding downstream 28643 2286869 ~ 2298484 (-)
G131889 LOC107384710,LOC100693841,LOC103365478,LOC106560692,LOC106602896,LOC107098142,LOC102777155,LOC105007919,LOC101477102 non-coding downstream 34641 2289510 ~ 2292486 (-)
G131884 NA non-coding downstream 48611 2278233 ~ 2278516 (-)
G131873 NA non-coding downstream 79998 2246771 ~ 2247129 (-)
G131913 NA non-coding upstream 889 2328597 ~ 2328982 (-)
G132078 NA non-coding upstream 87775 2415483 ~ 2447423 (-)
G132116 NA non-coding upstream 132040 2459748 ~ 2459961 (-)
G132126 NA non-coding upstream 164635 2492343 ~ 2499180 (-)
G132129 NA non-coding upstream 183795 2511503 ~ 2515213 (-)
G131863 NA other downstream 30674 2293633 ~ 2296453 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 462355 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 607901 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 622128 1686309 ~ 1704999 (-)
AMCG00011603 NA other downstream 1320990 998991 ~ 1006137 (-)
G132117 NA other upstream 133399 2461107 ~ 2461750 (-)
G132140 NA other upstream 239037 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 282020 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 314955 2642663 ~ 2643456 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 842000 3169708 ~ 3173836 (-)

Expression


Co-expression Network