G132072


Basic Information

Item Value
gene id G132072
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2938370 ~ 2941171 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165616
ATTCCTGACACTTTTATTGGCAAACAATTTAATACACCACAGTCTCAGCAGACTGGGTACAGACGCCACCTAGTGGTCTCCTATaggcaaaacaatatttaaaggcACAGGTCATACACACTGATTCCAAGTGTGTTTAAGCTCTGATTGGCTTTTTAATGCTTTTCTAACAGAGGGTACATTAATATCCACTCATCTGTGAAACACAATGGTGTAAACAACAGAAAATCCAATTggcacacatatacaaataaataaaaaagtaatgaattcacaggaaattaagtttaattagaGGCCCATTATGAAGGCACAGTCGTGTTCAATTAAACCGTAAAATCACACGCTGTCACAGTCAGCTGGAGGACAGTCGGACATCAGTTGATATGGAGAAGATTTTCTTGAGTGGAGGGCACGGGTGTATTTGTacacatctgtctctctctccatccctctctcttttaaaagccgtaaacattttcaatactgGGGTACCTTTCAAGGGGTTTCTTTGTTTAGTGTAGCAAGTGCATGTGCATTTCATGTtcggaaagagagagaaagagagagcaacACACAGCCAACCCAGGGGACTGCAGCAAACTCCACAAaccacttacacacacacacagatcagagCAGATTGTGGAAGCAAACGGCCATGTTGGGATATTTGAAAGACAAGTTTTTTCATCGTTATGCAAGTGaaatttgttaaaaacaaaagaaaaagacagtgCTGCAATTTActtgtgtgtgcgtctgtgtgtgggAGGGTCGATTTAATGAACAATTACTTtagtgcaattaaaatacagaccAGAACGACAGGTGAGGAAGAGACAGAgctaaagagagagaaactgaacaTGTTGGGCATAAGAATTCGCACCGAGTGGATgatgggtgggtgggtgggaaTTTTAAACATCCTCTCTGAGGATCCCACTGTTGTTGCCCCCGCAGATGCACACGCACAGCAAGGCACAGCACCCCCCCACGAGCAGCACCCCCAGCAGGATGTACACCAGGGTGGTCGTCCAGAAGGCGAACAGCCCCTTACCTGTGATGAACCagcagaagaggaagagggacGCCAGCGATGTCCAGGTGGTGCAGACGTTGCCCAGCAGCCCCCCGGTGCCGCCCTCTTCCTCGTTCTTAGTGCAGGGCAGGCAGGCCAGCAGGCTGAGGGCCACCGTGAAGACCCCCGAGACCACCAGGTAGATGGGGATGTAGCGCTGGCGGGGGCAGTCGTGCAGGTACAGCACgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165616 True 1273 TUCP 0.47 2 2938370 2941171

Neighbor

gene id symbol gene type direction distance location
AMCG00011723 NA coding upstream 196 2930262 ~ 2938174 (+)
AMCG00011717 NA coding upstream 126707 2805091 ~ 2811663 (+)
AMCG00011712 LOC105031478 coding upstream 156072 2777860 ~ 2782298 (+)
AMCG00011714 NA coding upstream 193797 2734189 ~ 2744573 (+)
AMCG00011705 NA coding upstream 299752 2637097 ~ 2638618 (+)
AMCG00011724 NA coding downstream 23059 2964230 ~ 2974831 (+)
AMCG00011733 NA coding downstream 128670 3069841 ~ 3074129 (+)
AMCG00011740 NA coding downstream 169441 3110612 ~ 3111553 (+)
AMCG00011738 her8a,LOC105027206,LOC107666285,LOC107750660,LOC107563304,LOC108443965 coding downstream 185353 3126524 ~ 3128860 (+)
AMCG00011737 LOC105891152 coding downstream 200271 3141442 ~ 3152046 (+)
G131992 NA non-coding upstream 276819 2661257 ~ 2661551 (+)
G131988 NA non-coding upstream 290930 2645548 ~ 2647440 (+)
G131983 NA non-coding upstream 303420 2634331 ~ 2634950 (+)
G131942 NA non-coding upstream 473764 2463991 ~ 2464606 (+)
G131941 NA non-coding upstream 476020 2462145 ~ 2462350 (+)
G132215 NA non-coding downstream 47575 2988746 ~ 2989007 (+)
G132268 NA non-coding downstream 162989 3104160 ~ 3115307 (+)
G132270 NA non-coding downstream 228567 3169738 ~ 3250107 (+)
G132293 NA non-coding downstream 297315 3238486 ~ 3245852 (+)
G132433 NA non-coding downstream 626716 3567887 ~ 3568440 (+)
G132058 NA other upstream 58110 2877274 ~ 2880260 (+)
AMCG00011718 naa38,lsmd1 other upstream 80086 2852817 ~ 2858284 (+)
AMCG00011713 LOC107377402,LOC101163851,LOC108249525,LOC106525311 other upstream 237980 2691539 ~ 2700390 (+)
G131981 neurl4,LOC102791343 other upstream 322309 2615453 ~ 2616061 (+)
AMCG00011702 NA other upstream 387333 2541795 ~ 2551037 (+)
G132221 NA other downstream 60261 3001432 ~ 3004662 (+)
AMCG00011735 NA other downstream 137246 3078417 ~ 3101137 (+)
G132271 NA other downstream 260203 3201374 ~ 3204597 (+)
AMCG00011770 NA other downstream 951210 3892381 ~ 3897596 (+)
AMCG00011771 NA other downstream 962504 3903675 ~ 3977662 (+)

Expression


Co-expression Network