G132126


Basic Information

Item Value
gene id G132126
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2492343 ~ 2499180 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165679
cccccgccccccccCTACGCCGCTGTCCGATTTTCATTACCTTCACGCCAAGGAGCCAAGCGATCGCTGAACCAGTGCCGTCGATTTTTAGCCTCTGTTCAATGGCTGGTTTACTAGTACTATGACATCTTGTTTATTGGATTgctaactttattattattatgatgatatatacataaacCTTCTTGCATTTGCTAGATCCTTTATGATCAAAtctgtttggtttttttttttgtgcgttAGTGATTTTATTTCCTGTCGTTGAGATGTATCAAAAGATCTCTCCCGGTTGATAAAGCTCGTGGGGGGGAGAGACTCCCGTTTCGTGGACGTCTCCTCGCCCCCGGAGGCGGGAGGGTACAGCAGTGATGGTACGGTCTCCGATCGCGCTTCGCAAAGCACTGGTCTCCGACAGCTCGGGGGGTGCCGGGGCTTCGGTTGAGCtccattttcagatttttgtacatttttttttttttttttttttcttttggttttccCCCCCTTGCCTGACTCCTGGCTgcaacgtgtgtgtgtgtgtgtgtgcgtccaGAGTGGGCTAGCGAGTCTACATCTGCGTGTGAATGAGTTTGTGACgattgtgtgtgagtgcagaCTGGATGGggtttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165679 True 631 lncRNA 0.48 2 2492343 2499180

Neighbor

gene id symbol gene type direction distance location
AMCG00011700 capgb,capg,LOC107665882,LOC107657288,LOC107556576,LOC107584402,LOC107733451 coding downstream 6613 2481091 ~ 2485730 (-)
AMCG00011699 NA coding downstream 19036 2468228 ~ 2473307 (-)
AMCG00011698 NA coding downstream 75747 2403971 ~ 2416596 (-)
AMCG00011697 eif5a,LOC107691471 coding downstream 98971 2387612 ~ 2393372 (-)
AMCG00011691 NA coding downstream 126349 2362204 ~ 2365994 (-)
AMCG00011709 NA coding upstream 92679 2591859 ~ 2599202 (-)
AMCG00011710 NA coding upstream 140283 2639463 ~ 2641522 (-)
AMCG00011707 LOC105907188,LOC103386604,LOC106608754,LOC103358028 coding upstream 157049 2656229 ~ 2656728 (-)
AMCG00011716 NA coding upstream 250014 2749194 ~ 2776484 (-)
AMCG00011715 NA coding upstream 285580 2784760 ~ 2785717 (-)
G132116 NA non-coding downstream 32382 2459748 ~ 2459961 (-)
G132078 NA non-coding downstream 44920 2415483 ~ 2447423 (-)
G131913 NA non-coding downstream 163361 2328597 ~ 2328982 (-)
G131909 NA non-coding downstream 164635 2327127 ~ 2327708 (-)
G131905 NA non-coding downstream 172345 2317940 ~ 2319998 (-)
G132129 NA non-coding upstream 12323 2511503 ~ 2515213 (-)
G132137 NA non-coding upstream 51276 2550456 ~ 2551120 (-)
G132138 NA non-coding upstream 53178 2552358 ~ 2553259 (-)
G132151 NA non-coding upstream 135116 2634296 ~ 2634952 (-)
G132155 NA non-coding upstream 146393 2645573 ~ 2647388 (-)
G132117 NA other downstream 30593 2461107 ~ 2461750 (-)
G131863 NA other downstream 195890 2293633 ~ 2296453 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 627571 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 773117 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 787344 1686309 ~ 1704999 (-)
G132140 NA other upstream 67565 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 110548 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 143483 2642663 ~ 2643456 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 670528 3169708 ~ 3173836 (-)
G132352 NA other upstream 702190 3201370 ~ 3207354 (-)

Expression


Co-expression Network