G132129


Basic Information

Item Value
gene id G132129
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2511503 ~ 2515213 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165682
ccaccctggAAACCGAGCAGGCTCAGAAGTCCAAAGGATCACGTTCTAGGTCGCGCCCACCAGGAGCAGGGCAGAGAGGCGGCAGCTGAAATGATGGCCCTCTCAGAACGGCAGAGTGTAATTGGCCTCATTAGGGACTGCCGCCGGGGAGCCGTTGAAGGTGGGCAGGGGAATGACTGGGGGTCCCCGTCTTCTCGCTGAAGCCAGAAAGATTATGTAGGAGCAGGGAACTCCAGTTCTCAAGAGCCAGAAGTGTTTATTcctgcccccaccccaccctcagGGTATTTATGCCTTAATTACAGCTGGTTCTTCCCATCCACAAGTCCAATTCCCCAGCAGATTCCAGCTCTAATTGCTAATTGAAACCTGCTGGGGGCCCCATTAAACCCTCGAGGACAGGAAGCAGACCACTCCCACCCTGTACAGACGCACAATAACTTCCTGAGCCCACCCTATGTCCAACATGGGACTGAACACCAAGCTCTTCTTCACCGtgagaatatatttgtttcagattgaCGGGAGAATATATTCCACTCAATTACAGCACATACTACACTTGCACTCACTCACATTTGGAGAGActgcaatacaatatttcacACAATCTACACAAACAAAGTCTACTCTgtccagcacagcacagatcacgcacacacacatacataaaaaaacaaaacaaaaaacaccaccaaCTGCTGCCCTAAGTCACATATCGGCAGCTGAATGTCTCGAACGGTACCAGACAAACTCAACTCCCCATCAGTGgggaagaggaaaataaaagctCAAACGGCCTGCAGTCAGACTGGGGCAaacttgttttctctttctttcctggaagaacaagatttaaaaaccaactggggagagggggaagcAGCCACAGATGGCATCCAGAACTGTCCACTTCAATTTGTCTGTACTTTTAGGGAATTTTTAGGTCAGGTGgctcattataataaaaataaagttacagCGGCTGCTTCAACAAACGCAGTCAAGTTTCCCGGCTGACGGCTGCTGCCTGGGCACACCTCTCGCCTGGGTGCCACAGCCTGCAACACGAGGGGCTGAGTACACAATGCCCACCTTCCCTGTGGGGGGCGCATTGTCACCTGCCTCAACCGCAACAACACTGCACAACCCCTGGGTTTTTAGCTAAAATCTCTGCTCACTATGGGACTCCTACTAAGGCAAACCACAAAGCAATTTCCACCTCTGTGTCACCCGTTTTGAATCTCCAGTTACACTTTAGTATCCAAGCGCATcttttgcaatttaattaaatctgaaaatcaTGTTTCCCACTCAGATCTGGAACGGGTAGAAAGCCGACCGGTGAGACCAGACTTTGGCACACAGAGTACAAAGCAGAAGCCCCTGGCGTTTTTATTCCCACTGGTGGGGTAGATGGCGGTTTCTACACGTAAACAGTAACAGCCACAGTTGGGACAAAGCAACGTTGTACCCTTTGACTAAGAGACAAAGCTGGACTGTATGACGCCACACAAAAGCAAGGGGACGCGTGTAGCAAGGAAAACAAAGCACTATTACATTATAGTACATTCTATAATCAAAACCGATACACAAACTATTTTCTCTTGCTTACCCTTCACACAAAAGACTGGACGGCAGCCTACCTCTATGATCTCACACAGGCCAAAGGAAAGGACAGAAATCTCTCTCTAACCCACGGCAGGACTGATCAGTTTGGGCCGTTACTAAATACCAGATTGACTTCAAACTCGACACACCGATAAAATCCCACTTCtcacaccaaaaaacaaaacaaaagagtgaCTCTGTAGCCGTGTCTTCGGGAAGCTGTGGGGAGAGATGGGTATTAATACGAAGACATGCCAGACTAGCTAAACTCCCAGCACCGTCCATATTGGAAGAAAGAGCTAGAGAGTGGCGACACACACAACAGGAGGATCTACTGCCATTTTCTCTTAGGAAATACGAAATCGTCTCCCTTCAATCTCCCTGTACTTTAAAACTCATAAAAACTACGTCTCATccccaaaaacaggaataaTGCTTGGTTATATAAGCCGAGGTGgagctttctttctcttcctccccctctctctttctttcttccgcCCCGCAGATCCAGCTGCTTCAACTCACACAATAAGCCCCAGCCAGACTCCATGTTTTTTCAGCTCCAAAAACGAGTCCCTCCAACTTAAAATACGTTTCACAGTTAATTAAAGACAATAAATCAAGCCAAATCAACACAGCACCGAAGACCAGACTACTGAGAGTGAACAACAGGACTTTTTTTAAGAATCAACTCACATAAAAACACGTTACACAAGGACCcacacaaaacagtttaaaactGAACAGCAGGGCTAAAACACTGAAACCCAGCACTTCAGATTGAGTGTCACCCAATCACAACAGCCATTTCACCCTTTTACACGACCGAGGACTTAAAACACGCCATCAGAGCTGAAATCaagcattcatttattataataaagtgTTAAAACCGCCTCAAAGTGAACTAAATTGAGTTTAAACCCCTCCACACCGATGCAGACCCATCCATTGTGGCTGTGACTTACCCACCCGTggaaatacacacattaaatcaaactgGAGGGACATTTATAGGCAATGTCCCACAGTATAAGATGTCCACGCAAATCCACTCACTCGCACCGTGGACTAGGGGTTGAAACCAGGAAACAAAGctatctccatctctctctcccgccTGGTTTAAATAACGCACATTTAGGAGTTATTGAAATCTATTCGGGACTAAAAACCCACAGTATTGAGGTATTTTCAGTGGGGAGATCATCTCACCCTTCCCCCAAAACAGGAACCCAAGCCgtttctccttctcttcccGCGGCCATACTTGTTTCTTTTCTACAGTAGGAGAGGGTATCTCATAAAGGCCTATGCTGTTAAAATCCCTATTTTCACCACCAAAACAACCTCCTCACAGGTAGTAAATATCGATTCGGCCTCGAAACGCTCGTTTAGATATTGGCAAGACTTGACGTATGAAGTCCCATCGAAAATATTccattttttacatatttaggCTTCCCCCGGACTTTCCTGCAGCGCCCAGCCGGAGAGCAGGCTCCCTGTCGCGGCGTCGCCTCCTACTGGAATCCGAGGCTTCTCGAAGACTCCCGTGAAGTGGAAAAAATCCGCAAAAATGCGACAAAACGTCGACGTGGTTGGAAAGGCGCTGCCGATTTGAGTCAGGGTGCTGTTTTTCAAGGGCGGATTTGTGGGTTTTAGTGGGACGCTTTATTGTCCCTTTCCGTGCGGGGCGCCGCAGGCCCGGAGCGGGAGCCTCTGCTTTTCCAAGAGCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165682 True 3355 lncRNA 0.47 3 2511503 2515213

Neighbor

gene id symbol gene type direction distance location
AMCG00011703 polr2a coding downstream 811 2496064 ~ 2510692 (-)
AMCG00011700 capgb,capg,LOC107665882,LOC107657288,LOC107556576,LOC107584402,LOC107733451 coding downstream 25773 2481091 ~ 2485730 (-)
AMCG00011699 NA coding downstream 38196 2468228 ~ 2473307 (-)
AMCG00011698 NA coding downstream 94907 2403971 ~ 2416596 (-)
AMCG00011697 eif5a,LOC107691471 coding downstream 118131 2387612 ~ 2393372 (-)
AMCG00011709 NA coding upstream 76646 2591859 ~ 2599202 (-)
AMCG00011710 NA coding upstream 124250 2639463 ~ 2641522 (-)
AMCG00011707 LOC105907188,LOC103386604,LOC106608754,LOC103358028 coding upstream 141016 2656229 ~ 2656728 (-)
AMCG00011716 NA coding upstream 233981 2749194 ~ 2776484 (-)
AMCG00011715 NA coding upstream 269547 2784760 ~ 2785717 (-)
G132126 NA non-coding downstream 12323 2492343 ~ 2499180 (-)
G132116 NA non-coding downstream 51542 2459748 ~ 2459961 (-)
G132078 NA non-coding downstream 64080 2415483 ~ 2447423 (-)
G131913 NA non-coding downstream 182521 2328597 ~ 2328982 (-)
G131909 NA non-coding downstream 183795 2327127 ~ 2327708 (-)
G132137 NA non-coding upstream 35243 2550456 ~ 2551120 (-)
G132138 NA non-coding upstream 37145 2552358 ~ 2553259 (-)
G132151 NA non-coding upstream 119083 2634296 ~ 2634952 (-)
G132155 NA non-coding upstream 130360 2645573 ~ 2647388 (-)
G132166 NA non-coding upstream 210454 2725667 ~ 2726283 (-)
G132117 NA other downstream 49753 2461107 ~ 2461750 (-)
G131863 NA other downstream 215050 2293633 ~ 2296453 (-)
AMCG00011648 LOC104949454,LOC101069368,LOC103480483 other downstream 646731 1849899 ~ 1864772 (-)
AMCG00011645 mpp1,vamp2,LOC106603197,LOC106523110,LOC107742350,LOC107720682,LOC107554313,LOC107082578,LOC107386619 other downstream 792277 1707717 ~ 1719226 (-)
AMCG00011640 NA other downstream 806504 1686309 ~ 1704999 (-)
G132140 NA other upstream 51532 2566745 ~ 2577837 (-)
AMCG00011711 neurl4,LOC106577658 other upstream 94515 2609728 ~ 2617328 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other upstream 127450 2642663 ~ 2643456 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 654495 3169708 ~ 3173836 (-)
G132352 NA other upstream 686157 3201370 ~ 3207354 (-)

Expression


Co-expression Network