G132155


Basic Information

Item Value
gene id G132155
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 2645573 ~ 2647388 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165710
TCTTCTTCAAACTAGAAAAAGTCCTCTCCCAAATTGAGGAGACGGGTGATCAGTCCGACGGGACCACAGACTAGAAGAGTCAAGAGAGGGCatcaaaaaaatacaaaagaccaAATCAcgttttttaatgtatgaattaattaatagtttGTTTATGTCCGTGACGGTTTCTTTGCCGGAGATGTAAGCAGGAGACCAGGGCTCTCTCCACTCCCGCTCTGATTTCCAACTCTTACGTTTACAAATCTCTCATTTGTTTCCCTCCCCGTCGTCTCcacctgtgtccctgtgtgtgctGGTCATCACAATAAGCCATACTATCagtacattttctctctctctctcatactgTTGCCAAGCCAGTTCTCTAGCTCGTTTTTTTCCcctatatatagtataaatatatagaacattttatattttttattttagagcCATAAACGGCTGGCAGCACTGAAAAGCACACATTTACAATCCTGAGGAAAACGAGACAAACTAAAAAAGCAAAGATGATTTTGAGGGAGGCATCTCATGACGAAGGGGAATCCACGAGATCAATCGCTGAGATCAGAAGGGATTCCTCCCGTGGGGTTAATACTGATTATCTGcgcgtttttttgtttgttcgttagtaatttttttaaagaaatgcagtAGGCGATTTGTAAatattgagaaaaaaattataaaatcatgaaaaaaaaaaaacatggtggtGCGCTAAATTCAAAACGATCGACTCGTGTTAGATCGAGAGTTCTGTTTACGAGGAAGAGGCTCTCGGAAGGGTTTTGGCCAGCcgtgattttagtttttgttggtCTGTTTCGGAAAACCGCCCGCCGCGAGCCTAAGCTCAGCACCGGCCGACGTcgcaaaaaaaattaaaaaacttcGCCGGTTTCACGGAGAACGCTGCACATCGGGGGAAGTTCCTCCCGCGTGCGACACCGGTTGTGTATCCTGTGAAGACGAGcggcttgtttttatttatgtgtgaacttttattttttaagtttattttcgTGCTCCGGGATAAAGAAGGGGAATCAAATAGCGGGCGTACGGTTTCCCACTTCCTGTCGGCCGCAGATCCCAAGAGACGGTAGTTCCCGGGTAGTCCAACTGCATCGGCcggttattttatttatcttaatatGGACATTTATCTTATCCGCCCGTGGAATTTATACGCTGGGGTTGGCGGATGGGTCTTGATTTTTATGCACTTCTGTTGATGGGAAGTAGTTCGCAGGGAAAGTCTGAATTACAGGAAACGTAGTGATAATAGTAACGGCAGTGATGACGATGCTGTGAATTGGTGCGACTGAGAGGGAGCAGCTTCCACTCGATcgtgttttgtttgatttgatttgatttgattctgtTTTTGCTGGGGAGACCGTAGAGCGGGGAATATAGACTGGCCAGTATAGAGGCAGACCACAGAAGACAGCTTTGgagtatattaaaaaatacttttggtaGATCGTTCAAGAGagcttttgctttatttatgtatttatttatttgtatttattggatTTTTCGTCTGTGTGTCTCgttttcacttttgtttcatCTGTAGCACAGAAAGGCGCTGTTCCTGTCTTGGGTTCaacattgttgcttttttattttatttatttatttatttatttatttgttattttatttatgtatgtatttgggggagggggggttataTCAAGGCAGCAGTTAGCAATTGCCTTTTTGGaatttgtattaaaagaaaaaaaaaaaaaaaaaaatgaattaaaacctAACAGGACCGTCTCATTTTGTAGGCCTGAGC

Function

GO:

id name namespace
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165710 True 1816 lncRNA 0.41 1 2645573 2647388

Neighbor

gene id symbol gene type direction distance location
AMCG00011710 NA coding downstream 4051 2639463 ~ 2641522 (-)
AMCG00011709 NA coding downstream 46371 2591859 ~ 2599202 (-)
AMCG00011703 polr2a coding downstream 134881 2496064 ~ 2510692 (-)
AMCG00011700 capgb,capg,LOC107665882,LOC107657288,LOC107556576,LOC107584402,LOC107733451 coding downstream 159843 2481091 ~ 2485730 (-)
AMCG00011699 NA coding downstream 172266 2468228 ~ 2473307 (-)
AMCG00011707 LOC105907188,LOC103386604,LOC106608754,LOC103358028 coding upstream 8841 2656229 ~ 2656728 (-)
AMCG00011716 NA coding upstream 101806 2749194 ~ 2776484 (-)
AMCG00011715 NA coding upstream 137372 2784760 ~ 2785717 (-)
AMCG00011721 NA coding upstream 172955 2820343 ~ 2846905 (-)
AMCG00011719 NA coding upstream 201179 2848567 ~ 2852523 (-)
G132151 NA non-coding downstream 10621 2634296 ~ 2634952 (-)
G132138 NA non-coding downstream 92314 2552358 ~ 2553259 (-)
G132137 NA non-coding downstream 94453 2550456 ~ 2551120 (-)
G132129 NA non-coding downstream 130360 2511503 ~ 2515213 (-)
G132126 NA non-coding downstream 146393 2492343 ~ 2499180 (-)
G132166 NA non-coding upstream 78279 2725667 ~ 2726283 (-)
G132233 NA non-coding upstream 353649 3001037 ~ 3042256 (-)
G132261 NA non-coding upstream 431143 3078531 ~ 3089532 (-)
G132362 NA non-coding upstream 636433 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 772888 3420276 ~ 3432121 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 2117 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 28245 2609728 ~ 2617328 (-)
G132140 NA other downstream 67736 2566745 ~ 2577837 (-)
G132117 NA other downstream 183823 2461107 ~ 2461750 (-)
G131863 NA other downstream 349120 2293633 ~ 2296453 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 522320 3169708 ~ 3173836 (-)
G132352 NA other upstream 553982 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 588751 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 1222444 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 1290096 3937484 ~ 3944519 (-)

Expression


Co-expression Network