G132233


Basic Information

Item Value
gene id G132233
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3001037 ~ 3042256 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU165817
CTCTCACAGCGCTTTTAATATGAAACGAGCGGATGCGCATTTTCAGCCCTGATGAGAAGCCGCACAGATGCGTCACAGAATAAGATCCAGCCCATCGCGTCTGCGCATCGCGTCTCTTTAACCAGCAGACATGAACACAATGAACAAGTTACCTAGGGCAGCTCCCGGGGTCTCTCCTCCTCCGTGTCCGCCGCTTCTCAAACTCCGCTTCGCCGCCCGCAGCTCCCGCAGCCTCCAGCGCAGCCTCTCGGTCTCTCGCCGCCTTCGGCTCATCTCCTCTCGGTGCTCCGCCAGCGTCTCTGCCAGCGCCTTCCGCGCCGCACACTGAGCGGCTCTCATCAGCTCGGCCAGAGCCGAGGACAGGCGCTGTGTGAAGCGCTGGGACAGAGACATGCTGCTCGGGCTGCTGGGCGGCTCAGTGCGCAGACACTGTTTGTCACAAGACGGTCACTCTGGGGAGTCACAGCCGGTCTCTCCAACAACAGGATGCTACCGCTTCTATGGATGTTGGTTTCGCAGCTTGTATGCAGTCCTGGGCAGAAGTGTGTGCTGCCGGGGTCCTGTCGCGGCTGTTTGCTGTTAGGATCCTCCCGTCGGGGAAGCGGACACATCCGATGTCTGCAGCACGTGTCGgtcaaaaacaggaaaaccagAAACTGTCGCCGAAAGAGGATGTTTGTGTAACAGCTTATCTCGTAGAACAGCTGTTTTCACATCAGCTAAATTTGCTTGTACCTTAACATCCCTGTATTATCCctgtaatgataatattaatattaataattactgtTTTTTTCAGTAGTGTAATAAAAGTACGGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU165817 True 822 lncRNA 0.54 2 3001037 3042256

Neighbor

gene id symbol gene type direction distance location
AMCG00011730 NA coding downstream 16243 2975551 ~ 2984794 (-)
AMCG00011727 NA coding downstream 38410 2954437 ~ 2962627 (-)
AMCG00011726 NA coding downstream 55144 2938292 ~ 2945893 (-)
AMCG00011729 NA coding downstream 78806 2919841 ~ 2922231 (-)
AMCG00011731 NA coding downstream 91118 2900649 ~ 2909919 (-)
AMCG00011734 NA coding upstream 13660 3055916 ~ 3065952 (-)
AMCG00011742 NA coding upstream 94729 3136985 ~ 3138296 (-)
AMCG00011748 NA coding upstream 157431 3199687 ~ 3201575 (-)
AMCG00011746 NA coding upstream 161296 3203552 ~ 3207354 (-)
AMCG00011747 NA coding upstream 169468 3211724 ~ 3214816 (-)
G132166 NA non-coding downstream 274754 2725667 ~ 2726283 (-)
G132155 NA non-coding downstream 353649 2645573 ~ 2647388 (-)
G132151 NA non-coding downstream 366085 2634296 ~ 2634952 (-)
G132138 NA non-coding downstream 447778 2552358 ~ 2553259 (-)
G132137 NA non-coding downstream 449917 2550456 ~ 2551120 (-)
G132261 NA non-coding upstream 36275 3078531 ~ 3089532 (-)
G132362 NA non-coding upstream 241565 3283821 ~ 3289291 (-)
G132392 NA non-coding upstream 378020 3420276 ~ 3432121 (-)
G132395 NA non-coding upstream 399139 3441395 ~ 3457472 (-)
G132434 NA non-coding upstream 525631 3567887 ~ 3568440 (-)
AMCG00011708 slc25a35,LOC108245198,LOC102784467,LOC104950662 other downstream 357581 2642663 ~ 2643456 (-)
AMCG00011711 neurl4,LOC106577658 other downstream 383709 2609728 ~ 2617328 (-)
G132140 NA other downstream 423200 2566745 ~ 2577837 (-)
G132117 NA other downstream 539287 2461107 ~ 2461750 (-)
G131863 NA other downstream 704584 2293633 ~ 2296453 (-)
AMCG00011741 LOC107676000,LOC107586166 other upstream 127452 3169708 ~ 3173836 (-)
G132352 NA other upstream 159114 3201370 ~ 3207354 (-)
AMCG00011745 NA other upstream 193883 3236139 ~ 3240000 (-)
AMCG00011765 NA other upstream 827576 3869832 ~ 3879185 (-)
AMCG00011775 NA other upstream 895228 3937484 ~ 3944519 (-)

Expression


Co-expression Network