G132510


Basic Information

Item Value
gene id G132510
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 3800311 ~ 3822313 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU166164
ttatttgtatataaaggTTGCTACATTTCTCAGTGAGCAAAAGACCTCCACATTCTCTTCAGgcttctcctccttcctccccCCATCTCCCTCTTTCCCTGTGAAGTCTCCCTGGCTGCAGCAACTCTTAAGTTCACGCTTCCCCCCGtataccaaaaacaaaccattttaaaaatgcagccaCTATTTACAGcatatttacaaacacaacagTCACAAGTCAGAAATGTTGGCCCTAGTGCCCGAGCCTGAGCtccagccctgtgtgtgtgtgtcagtgtgtgtgtgtgtgtcagtgtgtgtgcgtgtcatgGGCTCTGGAGCCAAGCAATTCAGTCCCGCAGCGGAAGCAGATTGGGATCCTTGAATAACCAAAGCCTGGACGAGATCCTCCGTCGCTGAGCAACTAGAGACCAACCGGGCCAAACGCACTCCCCCGGGTCCCCCGTCAATGTGCGTCTGTGGGGTTCTGTCTGTGCTCGACCGTGTCGGGGCAGGGGCCGGCTCCCCGGCTCCACTTCTGTGTAGGTGGGAGTGTCTTaattgtgtgtttgagtgtctgtctctgagtgagtgtgtgtctgtgtatgcgTGTCAGTCTttctgtttgaatgtgtgtgtgtgtgtgagagagagtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166164 True 646 lncRNA 0.52 2 3800311 3822313

Neighbor

gene id symbol gene type direction distance location
AMCG00011759 NA coding upstream 132762 3661364 ~ 3667549 (+)
AMCG00011755 NA coding upstream 308756 3484762 ~ 3491555 (+)
AMCG00011754 NA coding upstream 351477 3448466 ~ 3448834 (+)
AMCG00011750 NA coding upstream 352464 3440089 ~ 3447847 (+)
AMCG00011749 NA coding upstream 388167 3409473 ~ 3412144 (+)
AMCG00011762 NA coding downstream 33096 3855409 ~ 3869281 (+)
AMCG00011761 mcm7,LOC107716516,LOC107744067 coding downstream 60312 3882625 ~ 3889058 (+)
AMCG00011769 NA coding downstream 89587 3911900 ~ 3914902 (+)
AMCG00011774 NA coding downstream 97356 3919669 ~ 3922626 (+)
AMCG00011776 NA coding downstream 125089 3947402 ~ 3965183 (+)
G132508 NA non-coding upstream 7810 3792229 ~ 3792501 (+)
G132506 NA non-coding upstream 11871 3788227 ~ 3788440 (+)
G132480 NA non-coding upstream 15115 3753947 ~ 3785196 (+)
G132468 NA non-coding upstream 86613 3693505 ~ 3713698 (+)
G132466 NA non-coding upstream 127874 3669681 ~ 3672437 (+)
G132518 NA non-coding downstream 18919 3841232 ~ 3841474 (+)
G132573 NA non-coding downstream 168114 3990427 ~ 3995729 (+)
G132574 NA non-coding downstream 169951 3992264 ~ 3992904 (+)
G132586 NA non-coding downstream 193814 4016127 ~ 4017756 (+)
G132596 NA non-coding downstream 287200 4109513 ~ 4111930 (+)
G132271 NA other upstream 595714 3201374 ~ 3204597 (+)
AMCG00011735 NA other upstream 699174 3078417 ~ 3101137 (+)
G132221 NA other upstream 795649 3001432 ~ 3004662 (+)
G132072 NA other upstream 859140 2938370 ~ 2941171 (+)
G132058 NA other upstream 920051 2877274 ~ 2880260 (+)
AMCG00011770 NA other downstream 70068 3892381 ~ 3897596 (+)
AMCG00011771 NA other downstream 81362 3903675 ~ 3977662 (+)
AMCG00011806 NA other downstream 1292777 5115090 ~ 5120098 (+)
AMCG00011830 vmhcl,LOC107560354 other downstream 1937545 5759858 ~ 5761248 (+)
G133059 NA other downstream 2006488 5828801 ~ 5829532 (+)

Expression


Co-expression Network