G132819


Basic Information

Item Value
gene id G132819
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5018963 ~ 5019423 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU166525
atttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcaggtcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgacaatataccctaacactctgtttgccttttttattgcttccccacattgtttggatggagaaagtgaggagtccacatagactcctaggtctctctcatgcgttacttcatctagttcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166525 True 461 lncRNA 0.46 1 5018963 5019423

Neighbor

gene id symbol gene type direction distance location
AMCG00011802 NA coding downstream 211274 4805890 ~ 4807689 (-)
AMCG00011797 NA coding downstream 238473 4778329 ~ 4780490 (-)
AMCG00011798 NA coding downstream 249159 4766530 ~ 4769804 (-)
AMCG00011800 NA coding downstream 273427 4745240 ~ 4745536 (-)
AMCG00011799 NA coding downstream 287502 4721755 ~ 4731461 (-)
AMCG00011809 NA coding upstream 108182 5127605 ~ 5133544 (-)
AMCG00011810 NA coding upstream 146745 5166168 ~ 5219056 (-)
AMCG00011818 NA coding upstream 341914 5361337 ~ 5399035 (-)
AMCG00011822 NA coding upstream 383222 5402645 ~ 5460948 (-)
AMCG00011821 NA coding upstream 508860 5528283 ~ 5529716 (-)
G132759 NA non-coding downstream 167961 4850720 ~ 4851002 (-)
G132747 NA non-coding downstream 207105 4811547 ~ 4811858 (-)
G132717 nlgn2,LOC107386614,LOC106563375 non-coding downstream 324158 4694438 ~ 4694805 (-)
G132716 LOC102778775,LOC103391145 non-coding downstream 325721 4692750 ~ 4693242 (-)
G132711 NA non-coding downstream 446015 4572725 ~ 4572948 (-)
G132833 NA non-coding upstream 21560 5040983 ~ 5069667 (-)
G132862 NA non-coding upstream 142762 5162185 ~ 5163811 (-)
G132977 NA non-coding upstream 611671 5631094 ~ 5631526 (-)
G133076 NA non-coding upstream 834514 5853937 ~ 5854156 (-)
G133080 NA non-coding upstream 837240 5856663 ~ 5857165 (-)
G132788 NA other downstream 14354 5004165 ~ 5004609 (-)
G132712 LOC105024602,LOC106563375,LOC105902387,LOC107564776 other downstream 424514 4593693 ~ 4594449 (-)
AMCG00011792 NA other downstream 526406 4482151 ~ 4492557 (-)
G132693 NA other downstream 541984 4474605 ~ 4476979 (-)
G132667 NA other downstream 799980 4218549 ~ 4218983 (-)
AMCG00011811 NA other upstream 123042 5142465 ~ 5150213 (-)
AMCG00011812 NA other upstream 270751 5290174 ~ 5328724 (-)
G133026 NA other upstream 681663 5701086 ~ 5703917 (-)
G133032 smyhc1,LOC100136150,LOC103364123,LOC103375112,LOC101484004,LOC102294892,LOC102297239,LOC103482310,LOC106963427,LOC103135328 other upstream 687860 5707283 ~ 5793845 (-)
AMCG00011831 smyhc2,LOC107560354,LOC108436074,LOC108436073,LOC102297239,LOC102201055,LOC101483728,LOC103396567 other upstream 687970 5707393 ~ 5720981 (-)

Expression


Co-expression Network