G133059


Basic Information

Item Value
gene id G133059
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5828801 ~ 5829532 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU166858
CTGCCATGCAGCCGGGGAAGCGCTCTGCCCTGGCCTTGGCGAACTCGCTCTCGCTCATCCAGTTGCCCAGCTGGCTCTTGGCGCCCGCTGCTGTCGGAGGCAGGGCATCACGCTGCTGCGGCGTCACCATCACAGTCTTACTCTCCACACGAGCCACATCCTTGGGGTCTGTACGAGCCAGCCAGCAGTTGTTGTATTTCCTCAGTCTCCTGATCACTCCGTCTCTCTCCAAGACGCCTAGGATCTCGGCTGTCTCCTCGGGCTTCCCGGTCATCACGGAGATGCCCGCTGGCCGGCACATCTCCACGGCCCCGCCCACATACTCCTGCACGGAGCGAGGGagcgaggagagagagagcgagagacagcgtacaccccccccacccagagcccagtgcctgagagagagagagagagagagagagagagagaga

Function

GO: NA

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU166858 True 434 TUCP 0.63 2 5828801 5829532

Neighbor

gene id symbol gene type direction distance location
AMCG00011839 NA coding upstream 3935 5818212 ~ 5824866 (+)
AMCG00011838 LOC101484004,LOC103375112,LOC102294892 coding upstream 36524 5788969 ~ 5792277 (+)
AMCG00011829 NA coding upstream 112655 5715341 ~ 5716146 (+)
AMCG00011828 pabpn1,LOC107758815,LOC107589928 coding upstream 124880 5696727 ~ 5703921 (+)
AMCG00011826 NA coding upstream 199987 5623410 ~ 5628814 (+)
AMCG00011835 psme1,LOC107691441 coding downstream 6078 5835610 ~ 5842813 (+)
AMCG00011836 dcaf11 coding downstream 16610 5846142 ~ 5850008 (+)
AMCG00011834 NA coding downstream 42437 5871969 ~ 5883438 (+)
AMCG00011855 NA coding downstream 80949 5910481 ~ 5911354 (+)
AMCG00011852 NA coding downstream 95375 5924907 ~ 5936489 (+)
G133014 NA non-coding upstream 29445 5772063 ~ 5799356 (+)
G132997 NA non-coding upstream 145993 5682073 ~ 5682808 (+)
G132993 NA non-coding upstream 147403 5680468 ~ 5681398 (+)
G132820 NA non-coding upstream 762340 5021199 ~ 5066461 (+)
G132818 NA non-coding upstream 809413 5019001 ~ 5019388 (+)
G133060 NA non-coding downstream 4283 5833815 ~ 5834041 (+)
G133066 NA non-coding downstream 14732 5844264 ~ 5845059 (+)
G133074 NA non-coding downstream 22342 5851874 ~ 5852725 (+)
G133077 NA non-coding downstream 24956 5854488 ~ 5854709 (+)
G133090 NA non-coding downstream 40413 5869945 ~ 5870156 (+)
AMCG00011830 vmhcl,LOC107560354 other upstream 67553 5759858 ~ 5761248 (+)
AMCG00011806 NA other upstream 708703 5115090 ~ 5120098 (+)
AMCG00011771 NA other upstream 1851139 3903675 ~ 3977662 (+)
AMCG00011770 NA other upstream 1931205 3892381 ~ 3897596 (+)
G132271 NA other upstream 2624204 3201374 ~ 3204597 (+)
AMCG00011837 NA other downstream 57385 5886917 ~ 5888884 (+)
AMCG00011853 zfhx2,LOC108245441 other downstream 63992 5893524 ~ 5907174 (+)
AMCG00011873 NA other downstream 255320 6084852 ~ 6102011 (+)
AMCG00011876 NA other downstream 426418 6255950 ~ 6260389 (+)
G133327 NA other downstream 654415 6483947 ~ 6489208 (+)

Expression


Co-expression Network