G133147


Basic Information

Item Value
gene id G133147
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5896739 ~ 5897003 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU166959
GTCCAACAGTCTGTCCAGGCAGGCGGGCAGCACGCTGTGTCTCTCCGTCAGGTGTTCAGAGAGTGTCCGTCGGTCGCCCATAACGCACTGACACAGAGGGCAGGTCCACACGCCCACCCCCTCACCGCCACACGGCACACTCACACCCAACacctcctgagagagagggagagagggttaatacagacacactgactggacactacagcatattaacactgcactgagagagagagggttaatacagacacactgactggacact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166959 True 265 lncRNA 0.57 1 5896739 5897003

Neighbor

gene id symbol gene type direction distance location
AMCG00011858 NA coding downstream 3659 5889044 ~ 5893080 (-)
AMCG00011841 NA coding downstream 50207 5844281 ~ 5846532 (-)
AMCG00011848 NA coding downstream 63384 5826036 ~ 5833355 (-)
AMCG00011847 tm9sf1 coding downstream 78076 5811975 ~ 5818663 (-)
AMCG00011840 NA coding downstream 86089 5802295 ~ 5810650 (-)
AMCG00011856 NA coding upstream 39637 5936640 ~ 5939193 (-)
AMCG00011859 NA coding upstream 43647 5940650 ~ 5946920 (-)
AMCG00011857 NA coding upstream 84090 5981093 ~ 5986961 (-)
AMCG00011866 NA coding upstream 124710 6021713 ~ 6028050 (-)
AMCG00011871 slc7a8,LOC104932911,LOC103358414,LOC102238406,LOC107753926 coding upstream 157081 6054084 ~ 6057440 (-)
G133080 NA non-coding downstream 39574 5856663 ~ 5857165 (-)
G133076 NA non-coding downstream 42583 5853937 ~ 5854156 (-)
G132977 NA non-coding downstream 265213 5631094 ~ 5631526 (-)
G132862 NA non-coding downstream 732928 5162185 ~ 5163811 (-)
G132833 NA non-coding downstream 827072 5040983 ~ 5069667 (-)
G133156 NA non-coding upstream 28626 5925629 ~ 5973380 (-)
G133180 NA non-coding upstream 92111 5989114 ~ 5990502 (-)
G133181 NA non-coding upstream 95311 5992314 ~ 6035898 (-)
G133186 NA non-coding upstream 101605 5998608 ~ 5999229 (-)
G133209 NA non-coding upstream 182843 6079846 ~ 6080079 (-)
AMCG00011842 NA other downstream 24739 5860396 ~ 5872000 (-)
G133075 NA other downstream 44149 5851880 ~ 5852590 (-)
G133032 smyhc1,LOC100136150,LOC103364123,LOC103375112,LOC101484004,LOC102294892,LOC102297239,LOC103482310,LOC106963427,LOC103135328 other downstream 102894 5707283 ~ 5793845 (-)
AMCG00011845 LOC107680223,LOC107589804,LOC107688458,LOC107722552,LOC107088600,LOC103479335,LOC102208621,LOC105941235,LOC103147024,LOC108229072,LOC106514905,LOC107384191,LOC106590239 other downstream 136190 5741213 ~ 5760549 (-)
AMCG00011831 smyhc2,LOC107560354,LOC108436074,LOC108436073,LOC102297239,LOC102201055,LOC101483728,LOC103396567 other downstream 175758 5707393 ~ 5720981 (-)
AMCG00011860 NA other upstream 57627 5954630 ~ 5957925 (-)
G133183 NA other upstream 95411 5992414 ~ 5993018 (-)
AMCG00011868 NA other upstream 118907 6015910 ~ 6017080 (-)
AMCG00011867 NA other upstream 138916 6035919 ~ 6040630 (-)
G133208 NA other upstream 181367 6078370 ~ 6079367 (-)

Expression


Co-expression Network