G133186


Basic Information

Item Value
gene id G133186
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 5998608 ~ 5999229 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU167015
NtgtgtctgtgactgtgtgtgactATGCGTTTGACTGTGTGTGACTATGTGTGACAATgcgtctgactgtgtgtgtctgtgtgactgtgcaTCTGACTGTACGTCTCACCGTGTGAGTGCGTCGCTGTGTTACTGTGCAtttgactgtctgtctgtctctatacACATGCTACGCCAAGCTCTCTCTATTtttctctcgttctctctctctgtttgtgacATATACCCCTAATCTCAACACCCCTCTCCCCAAGGCTctactccctctctcccactctctcagggtgtgtctgtgttcaaACATTGACTCCTCTCCTCCTACTCCCTGTGCAATTCCCTTTCTCTGGCTGCCTCAGTTGGGACCCTGTTTAAGAAATTCTGGaccgagacagagagagagagaggaacaaagGGGACGGATGGAGAGAAGCTACAGATAAAAACAGAGAGATGGAAGAAGTGAATgaaagaacagagagagagagagactcgcACAGACACAGAGTTCACCCCCCCCAGTGAACTCTGAACTCGAAATACTGTAACCCACACCAGTTAACCAATTAATAAACACTGTGTGACACACCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167015 True 590 lncRNA 0.48 2 5998608 5999229

Neighbor

gene id symbol gene type direction distance location
AMCG00011857 NA coding downstream 11647 5981093 ~ 5986961 (-)
AMCG00011859 NA coding downstream 51688 5940650 ~ 5946920 (-)
AMCG00011856 NA coding downstream 59415 5936640 ~ 5939193 (-)
AMCG00011858 NA coding downstream 105528 5889044 ~ 5893080 (-)
AMCG00011841 NA coding downstream 152076 5844281 ~ 5846532 (-)
AMCG00011866 NA coding upstream 22484 6021713 ~ 6028050 (-)
AMCG00011871 slc7a8,LOC104932911,LOC103358414,LOC102238406,LOC107753926 coding upstream 54855 6054084 ~ 6057440 (-)
AMCG00011870 LOC106608857,LOC105020553,LOC105894166,LOC101077604,LOC107588204,LOC106577803,LOC104932911 coding upstream 58264 6057493 ~ 6063479 (-)
AMCG00011869 prmt5,LOC107668985,LOC102797577 coding upstream 68919 6068148 ~ 6077058 (-)
AMCG00011885 NA coding upstream 114345 6113574 ~ 6123209 (-)
G133180 NA non-coding downstream 8106 5989114 ~ 5990502 (-)
G133156 NA non-coding downstream 25228 5925629 ~ 5973380 (-)
G133147 NA non-coding downstream 101605 5896739 ~ 5897003 (-)
G133080 NA non-coding downstream 141443 5856663 ~ 5857165 (-)
G133076 NA non-coding downstream 144452 5853937 ~ 5854156 (-)
G133209 NA non-coding upstream 80617 6079846 ~ 6080079 (-)
G133277 NA non-coding upstream 271958 6271187 ~ 6347713 (-)
G133286 NA non-coding upstream 357236 6356465 ~ 6360880 (-)
G133417 NA non-coding upstream 639018 6638247 ~ 6638592 (-)
G133480 NA non-coding upstream 690779 6690008 ~ 6692129 (-)
G133183 NA other downstream 5590 5992414 ~ 5993018 (-)
AMCG00011860 NA other downstream 40683 5954630 ~ 5957925 (-)
AMCG00011842 NA other downstream 126608 5860396 ~ 5872000 (-)
G133075 NA other downstream 146018 5851880 ~ 5852590 (-)
AMCG00011845 LOC107680223,LOC107589804,LOC107688458,LOC107722552,LOC107088600,LOC103479335,LOC102208621,LOC105941235,LOC103147024,LOC108229072,LOC106514905,LOC107384191,LOC106590239 other downstream 238059 5741213 ~ 5760549 (-)
AMCG00011868 NA other upstream 16681 6015910 ~ 6017080 (-)
AMCG00011867 NA other upstream 36690 6035919 ~ 6040630 (-)
G133208 NA other upstream 79141 6078370 ~ 6079367 (-)
AMCG00011886 NA other upstream 226291 6225520 ~ 6227193 (-)
AMCG00011882 NA other upstream 231929 6231158 ~ 6233113 (-)

Expression


Co-expression Network