G133277


Basic Information

Item Value
gene id G133277
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6271187 ~ 6347713 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU167131
CTCTAGTGCCCCCCCAGGCCCTGTGTGCTATACAGCCCAGTCCTCTGTCACACAACTCTCTCCACAACTCCAGCTGCTCtgcaaaatactttattttatattttttttatactttttgtgATGCAGTACAGAGACAGCGGGGGGTGTCAGAGTGAGAGACGCAGCTCTCAGGAGACTGACACACCCAGCGCGTCACACAGCAGAGAGACAGTGTAAAGGCAGAGATAGTTAAAATCACAgatacagttttaaaagcatAAGATCTCACAGGAAATCATCGATCATTATTGCTGGTTATTGTGGGGAAACAGAAAACTAAATCACAATAATACACGTGTGATGTAGAATCACTGGCAGCGTCCGTTCGCTGCATTGGGCCGGTTGTTGGTGGTCTGGAAGTGGTCGGGCCGGCAGAGGTTGTCGATGTTGTCGCAGGCCAGCGTGATGAAGCTCTGGGTACGACTGACTCTAGTGACACTACACCTCCTGCGTATGTTGCTGCTCTGCACGCTGTACACTGTGAACATGTTAGCGCTCACACACAGGTTCCCCTGGTTGTTCTGCGAGAATCTCCTGCCTCCTGCCCTGCAAACGTTGTCGACGTTCGCCCGAGACCTTCATTGCCTCGTCTCGGGAGGACGTCAACAACGTTTGCaggggaggaggaaggagatACTCGGAGAACACCAATGAGAACCTGTGTGTGAGCACTAAGATGTTCCCAGTGTACACCGTACGGAGCAGCAACAGGCTCAATGTGTGTCTTGTCACCAGTGTCAATCATATCCAGAGCTACATCACACTGGGCTGCGACAACATTGACAACCACTGCCGGCCCGACCACTTGCAGAGCACCACCAACCAGCCCAACCCGGCGAACCCACCCTGCCAGTGATTCAGCAATAATGATCGATGATTTCCTGTGAGATCTTATGCTTttaaaactgtttcTGTGATTTTAACTATCTCTGCCTTTACACTGTCTCTCTGCTGTGTGACGCGCTGGGTGTGTCAGTCTCCTGAGAGCTGCGTCTCTCACTCTGACACCCCCCGCTGTCTCTGTCCTGCATCACagaaagtataaaatatataaaataaagtattttgcaGAGCA
>TU167137
GCTGCTCtgcaaaatactttattttatatattttatactttctGCGATGCAGGACAGAGACAGCGGGGGGGTGTCAGAGTGAGAGACGCAGCTCTCAGGAGACTGACACACCCAGCGCGTCACACAGCAGAGAGACAGTGTAAAGGCAGAGATACAgatacagttttaaaatcatAAGATCTCACAGGAAATCATCGATCATTATTGCTGGTTATTGTGGGGAAACAGAAAACTAAATCACAATAATACACGTGTGATGTTAGAATCACTGGCAGCGTCCGTTCGCCCCATTGGGCCGGTGGTTGGTGGTCTGGAAGTGGTCGGGCCGGCAGAGGCTGGAGATTCTCGCAGAACAACCAGGGGAACCTGTGTGTGAGCGCTAACATGTTCACAGTGTACAGCGTGCGGAGCAGCAACAGACTCAATGTGTGTCATGTCACTAGTGTCATTCCTGCCCGGAAATTCATCACACTGGCCTGCGACAAAATCAACAACCTCTGCCTGCCCGACCACTTCCAGACCACCAACAACCGGCCCAATCGGGCGAATGGACGCTGCCAGTGATTCTAACATCACACGTGTATTATTGTGATTTAGTTTTCTGTGGTTTTAACTATCTCTGCCTTTACACTGTCTCTCTGCTGTGTGACACTCTGGCTGTGTCAATCTCCTGAGAGCTGCGTCTCTCATGCTGATACCCCCGCTGTCTCTCCTGCATcacaaaaagtataaaaaagatataaaataaagtattttgcaGAGCAGCTGGTGTTGTGGGA

Function

NR:

description
PREDICTED: nuclear factor erythroid 2-related factor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167131 True 1114 lncRNA 0.50 4 6306347 6347713
TU167137 False 779 lncRNA 0.48 3 6271187 6330227

Neighbor

gene id symbol gene type direction distance location
AMCG00011880 NA coding downstream 32261 6236744 ~ 6238926 (-)
AMCG00011877 LOC106569426,LOC108438927,LOC102797877,LOC107668975 coding downstream 48393 6217174 ~ 6222794 (-)
AMCG00011883 NA coding downstream 63285 6194277 ~ 6207902 (-)
AMCG00011888 NA coding downstream 78574 6170770 ~ 6192613 (-)
AMCG00011879 NA coding downstream 114389 6156113 ~ 6156798 (-)
AMCG00011900 NA coding upstream 39811 6387524 ~ 6393414 (-)
AMCG00011904 NA coding upstream 83044 6430757 ~ 6435298 (-)
AMCG00011901 NA coding upstream 89987 6437700 ~ 6446839 (-)
AMCG00011902 NA coding upstream 120376 6468089 ~ 6471733 (-)
AMCG00011915 efs,LOC107668851,LOC107753933,LOC107691941,LOC107562533 coding upstream 158266 6505979 ~ 6509786 (-)
G133209 NA non-coding downstream 191108 6079846 ~ 6080079 (-)
G133181 NA non-coding downstream 235289 5992314 ~ 6035898 (-)
G133186 NA non-coding downstream 271958 5998608 ~ 5999229 (-)
G133180 NA non-coding downstream 280685 5989114 ~ 5990502 (-)
G133156 NA non-coding downstream 297807 5925629 ~ 5973380 (-)
G133286 NA non-coding upstream 8752 6356465 ~ 6360880 (-)
G133417 NA non-coding upstream 290534 6638247 ~ 6638592 (-)
G133480 NA non-coding upstream 342295 6690008 ~ 6692129 (-)
G133529 NA non-coding upstream 480269 6827982 ~ 6828221 (-)
G133547 NA non-coding upstream 508508 6856221 ~ 6856699 (-)
AMCG00011884 NA other downstream 16347 6251946 ~ 6254840 (-)
AMCG00011882 NA other downstream 38074 6231158 ~ 6233113 (-)
AMCG00011886 NA other downstream 43994 6225520 ~ 6227193 (-)
G133208 NA other downstream 191820 6078370 ~ 6079367 (-)
AMCG00011867 NA other downstream 230557 6035919 ~ 6040630 (-)
G133291 LOC105021468,LOC105907034,LOC107562413,LOC107588156,LOC106577802 other upstream 13678 6361391 ~ 6363728 (-)
AMCG00011895 NA other upstream 24787 6372500 ~ 6378472 (-)
G133365 NA other upstream 30385 6378098 ~ 6461788 (-)
AMCG00011903 NA other upstream 47299 6395012 ~ 6403156 (-)
AMCG00011913 acin1,LOC106608850,LOC103475989,LOC102237119,LOC106918835,LOC107377177,LOC107591382 other upstream 117557 6465270 ~ 6537760 (-)

Expression


Co-expression Network