G133286


Basic Information

Item Value
gene id G133286
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6356465 ~ 6360880 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU167150
ttttgtttaaataaactttattataaaaacaaaaacagtccaCAAACTCAGAACACACCCACTGCACACTCCTTCCCCCACCATCTCTCCATCAGTTGTAGCCTCTTGTGTCCCTCGCTCCAGGTCCATGCCGTCTCTCTCTTATAAttggagaggcagagagagggttCATACAGACAGACCGACTGGACACTgcactgggagagagagggttaatacagacacactgacagagagagagatggagggacaGGTGTGTCGTCATGAACAGACACCATAAAATCTGCACTTCAAAATCAGACCGACGTTACGCTACGTTGCACACGGAGGAGTGACTTTCCGTATAAAAATGAGTTTCAATGAACAGAACAAATGGGCGGGGGAGGGACAGACGGACACGGGCTGCAGTTGATCTGAGCGACTGACGGGGCGAGATATCGATGGGTTGATTGACCGTCTCACTGCCAAGCCTCGGGGGGGAAGGAATCGATCTGCGCCGTGTCCTGACGGACAGAGCCCTGGACGCTGTAGGACAGACGGACACGCATCCGCAGACAcCTTATTGGGGTTGTTCAGGAGAACAGTCTGGGTCACGTGACCTTTGCCCTCTGCCGGAATGACATCACCACTGGGAGCTCTCATCTGTAACTGAACACTctgagagacggagagggagagagattagTAAAGGCACACTGACCGGACGCCAGAGACCGACACTTTTCGACACAGTTGCTGGGCGCGTCGGGTACCTTGGGCACGGCCGCCTGCAGGCTGTAGTTCTGGAGGGGGTGCGGGTTGGCGTTGGTGGCCGTGATGGTCAGGGTGAGGGCCGTGTCGGACGCCAACGCCAAGCCCCGCCCCCTACAGTACTACAGCCTGCAGGCAAACCTGACTGATGCACTACAGTACACAGATACTGCACTAAGAAGTGGGGGCTGCCGTGATAATTCATGAGGAGGGGGTCATCAGTCACCGTTTGACGGAGGCGTCGGGGTCCTTCAGGCAGTCCACGATGGTCCCGCGGTGACGCTGCACGGCATTGTGGTCCGTCTGCACCATCCTCTGCAGAGACGTCATTGCGATGTAcctgagagaggggagggggtaCATTAACTCTGCAGTGAAAGAGCCACTTTTCGaaacagacagacggacacacagAGTCAGACAGACACTGGGATGGACACACAGACTGACCGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167150 True 1205 lncRNA 0.55 3 6356465 6360880

Neighbor

gene id symbol gene type direction distance location
AMCG00011894 NA coding downstream 33737 6316786 ~ 6322728 (-)
AMCG00011878 NA coding downstream 83469 6271202 ~ 6272996 (-)
AMCG00011880 NA coding downstream 117539 6236744 ~ 6238926 (-)
AMCG00011877 LOC106569426,LOC108438927,LOC102797877,LOC107668975 coding downstream 133671 6217174 ~ 6222794 (-)
AMCG00011883 NA coding downstream 148563 6194277 ~ 6207902 (-)
AMCG00011900 NA coding upstream 26644 6387524 ~ 6393414 (-)
AMCG00011904 NA coding upstream 69877 6430757 ~ 6435298 (-)
AMCG00011901 NA coding upstream 76820 6437700 ~ 6446839 (-)
AMCG00011902 NA coding upstream 107209 6468089 ~ 6471733 (-)
AMCG00011915 efs,LOC107668851,LOC107753933,LOC107691941,LOC107562533 coding upstream 145099 6505979 ~ 6509786 (-)
G133277 NA non-coding downstream 8752 6271187 ~ 6347713 (-)
G133209 NA non-coding downstream 276386 6079846 ~ 6080079 (-)
G133181 NA non-coding downstream 320567 5992314 ~ 6035898 (-)
G133186 NA non-coding downstream 357236 5998608 ~ 5999229 (-)
G133180 NA non-coding downstream 365963 5989114 ~ 5990502 (-)
G133417 NA non-coding upstream 277367 6638247 ~ 6638592 (-)
G133480 NA non-coding upstream 329128 6690008 ~ 6692129 (-)
G133529 NA non-coding upstream 467102 6827982 ~ 6828221 (-)
G133547 NA non-coding upstream 495341 6856221 ~ 6856699 (-)
G133571 NA non-coding upstream 609413 6970293 ~ 6970708 (-)
AMCG00011884 NA other downstream 101625 6251946 ~ 6254840 (-)
AMCG00011882 NA other downstream 123352 6231158 ~ 6233113 (-)
AMCG00011886 NA other downstream 129272 6225520 ~ 6227193 (-)
G133208 NA other downstream 277098 6078370 ~ 6079367 (-)
AMCG00011867 NA other downstream 315835 6035919 ~ 6040630 (-)
G133291 LOC105021468,LOC105907034,LOC107562413,LOC107588156,LOC106577802 other upstream 511 6361391 ~ 6363728 (-)
AMCG00011895 NA other upstream 11620 6372500 ~ 6378472 (-)
G133365 NA other upstream 17218 6378098 ~ 6461788 (-)
AMCG00011903 NA other upstream 34132 6395012 ~ 6403156 (-)
AMCG00011913 acin1,LOC106608850,LOC103475989,LOC102237119,LOC106918835,LOC107377177,LOC107591382 other upstream 104390 6465270 ~ 6537760 (-)

Expression


Co-expression Network