G133417



Basic Information


Item Value
gene id G133417
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 6638247 ~ 6638592 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU167347
aagtcctgtaagttgcgaggcggggcctccatggatcggacttgtttgtccagcacatcccacagatgctcgattggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtcattcatcagaccaggccaccttcttccattgctctgtggtccagttctgatgctcacgtgcccattgtaggcgcttttggcagtggacaggggtcagcatgggcaccctgactggtctgtggctacacagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattcactttttcagcaatttgagctacagta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU167347 True 346 lncRNA 0.52 1 6638247 6638592

Neighbor


gene id symbol gene type direction distance location
AMCG00011914 NA coding downstream 61915 6574867 ~ 6576332 (-)
AMCG00011911 slc7a7,LOC107731885,LOC107558406,LOC107683525,LOC107738042,LOC107574338 coding downstream 86778 6549362 ~ 6551469 (-)
AMCG00011912 slc7a7,LOC102780628 coding downstream 103220 6532792 ~ 6535027 (-)
AMCG00011915 efs,LOC107668851,LOC107753933,LOC107691941,LOC107562533 coding downstream 128461 6505979 ~ 6509786 (-)
AMCG00011902 NA coding downstream 166514 6468089 ~ 6471733 (-)
AMCG00011918 supt16h,LOC106577942,LOC106608973 coding upstream 14532 6653124 ~ 6664187 (-)
AMCG00011919 NA coding upstream 27363 6665955 ~ 6674419 (-)
AMCG00011921 NA coding upstream 36247 6674839 ~ 6676009 (-)
AMCG00011926 slc12a6 coding upstream 38098 6676690 ~ 6689522 (-)
AMCG00011929 NA coding upstream 68516 6707108 ~ 6712306 (-)
G133286 NA non-coding downstream 277367 6356465 ~ 6360880 (-)
G133277 NA non-coding downstream 290534 6271187 ~ 6347713 (-)
G133209 NA non-coding downstream 558168 6079846 ~ 6080079 (-)
G133181 NA non-coding downstream 602349 5992314 ~ 6035898 (-)
G133186 NA non-coding downstream 639018 5998608 ~ 5999229 (-)
G133480 NA non-coding upstream 51416 6690008 ~ 6692129 (-)
G133529 NA non-coding upstream 189390 6827982 ~ 6828221 (-)
G133547 NA non-coding upstream 217629 6856221 ~ 6856699 (-)
G133571 NA non-coding upstream 331701 6970293 ~ 6970708 (-)
G133591 NA non-coding upstream 427821 7066413 ~ 7066672 (-)
AMCG00011920 NA other downstream 6445 6607329 ~ 6631802 (-)
G133393 NA other downstream 89352 6530697 ~ 6548895 (-)
AMCG00011916 LOC107706350,LOC107738137,LOC107706351,LOC107668963 other downstream 92492 6539961 ~ 6545755 (-)
AMCG00011913 acin1,LOC106608850,LOC103475989,LOC102237119,LOC106918835,LOC107377177,LOC107591382 other downstream 100487 6465270 ~ 6537760 (-)
G133365 NA other downstream 176459 6378098 ~ 6461788 (-)
AMCG00011924 emc4,tmm85 other upstream 24540 6663132 ~ 6740536 (-)
AMCG00011928 NA other upstream 121815 6760407 ~ 6770294 (-)
G133526 NA other upstream 185672 6824264 ~ 6824588 (-)
AMCG00011941 NA other upstream 254067 6892659 ~ 6897827 (-)
AMCG00011957 NA other upstream 575645 7214237 ~ 7240360 (-)

Expression



Co-expression Network