G133825


Basic Information

Item Value
gene id G133825
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8062593 ~ 8117249 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU167877
GTCTTTTTGTCTCCTGTTTATTCAGTGAGAAGTACATGTTTCAAACTGAAATTGTTAAACACAGTCATAagcagctggaaaaaaaaagatcataagaacaaatgaaaaaaaaggatgGATCTTGTGAACACAATCAAAAACCCAGAAGAAAACTGAGGGGGAAACCAAAACAGAAAGTTGAAGAATGAATAGCTTAATGTAATGCTGACATCAAAAATGGCTGAAAAGCCAGATCACAAaagcatatgtattttttttttttttttctttcatttaaaactcattgtttttttttctccttatatataatataaacttctgcttttttatacatttaatatcaataatatcaatctgtaataatcatttatttaagttttaaagtCAAACCCATCattagctatttttttttttaatttttttttttttttttttttttttttttttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU167877 True 449 lncRNA 0.25 2 8062593 8117249

Neighbor

gene id symbol gene type direction distance location
AMCG00011994 NA coding upstream 37532 8020804 ~ 8025061 (+)
AMCG00011992 NA coding upstream 45706 7999228 ~ 8016887 (+)
AMCG00011985 NA coding upstream 107580 7931795 ~ 7955013 (+)
AMCG00011980 NA coding upstream 178332 7878175 ~ 7884261 (+)
AMCG00011981 NA coding upstream 242201 7816096 ~ 7820392 (+)
AMCG00012005 NA coding downstream 280777 8398026 ~ 8401203 (+)
AMCG00012004 NA coding downstream 308771 8426020 ~ 8428680 (+)
AMCG00012007 NA coding downstream 346956 8464205 ~ 8468828 (+)
AMCG00012010 NA coding downstream 469881 8587130 ~ 8587981 (+)
AMCG00012011 NA coding downstream 477767 8595016 ~ 8601876 (+)
G133820 NA non-coding upstream 59081 8002780 ~ 8003512 (+)
G133783 NA non-coding upstream 219122 7830564 ~ 7843471 (+)
G133665 NA non-coding upstream 487428 7551295 ~ 7575165 (+)
G133681 NA non-coding upstream 505881 7545283 ~ 7556712 (+)
G133682 NA non-coding upstream 514838 7546644 ~ 7547755 (+)
G133833 NA non-coding downstream 3650 8120899 ~ 8124699 (+)
G133921 NA non-coding downstream 79570 8196819 ~ 8197029 (+)
G133947 NA non-coding downstream 159126 8276375 ~ 8276580 (+)
G133961 NA non-coding downstream 331794 8449043 ~ 8578268 (+)
G134018 NA non-coding downstream 502258 8619507 ~ 8623220 (+)
G133822 NA other upstream 7572 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 24912 8028063 ~ 8037681 (+)
AMCG00011986 LOC107376962,LOC107102122,LOC103472755,LOC103153162,LOC106951371,LOC106916934 other upstream 86496 7960698 ~ 7976097 (+)
AMCG00011987 NA other upstream 134355 7925136 ~ 7928238 (+)
AMCG00011971 NA other upstream 487401 7559663 ~ 7575192 (+)
AMCG00012006 NA other downstream 261084 8378333 ~ 8397041 (+)
AMCG00012008 NA other downstream 392762 8510011 ~ 8520648 (+)
G133974 NA other downstream 443793 8561042 ~ 8563214 (+)
AMCG00012043 NA other downstream 1162739 9279988 ~ 9309931 (+)
G134291 NA other downstream 1534100 9651349 ~ 9653234 (+)

Expression


Co-expression Network