G133921


Basic Information

Item Value
gene id G133921
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8196819 ~ 8197029 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168009
TATACTTTTGATTTCCTAGTTGATCAACTaagacaaattatatatttataatagtaaTGTGGATGAAAGTCACATACTGTGAGAGATGCTTAACAATGTGGGAAACACTCAGATCAGTGGAGAACACCTAGGACAATTATTAATTCCTACAATTCTCATCTCCATGACTATCAGTGTGAGGATGTGAATGAGAATCATTTAGAAGATTATT

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168009 True 211 lncRNA 0.32 1 8196819 8197029

Neighbor

gene id symbol gene type direction distance location
AMCG00011994 NA coding upstream 171758 8020804 ~ 8025061 (+)
AMCG00011992 NA coding upstream 179932 7999228 ~ 8016887 (+)
AMCG00011985 NA coding upstream 241806 7931795 ~ 7955013 (+)
AMCG00011980 NA coding upstream 312558 7878175 ~ 7884261 (+)
AMCG00011981 NA coding upstream 376427 7816096 ~ 7820392 (+)
AMCG00012005 NA coding downstream 200997 8398026 ~ 8401203 (+)
AMCG00012004 NA coding downstream 228991 8426020 ~ 8428680 (+)
AMCG00012007 NA coding downstream 267176 8464205 ~ 8468828 (+)
AMCG00012010 NA coding downstream 390101 8587130 ~ 8587981 (+)
AMCG00012011 NA coding downstream 397987 8595016 ~ 8601876 (+)
G133833 NA non-coding upstream 72120 8120899 ~ 8124699 (+)
G133825 NA non-coding upstream 79570 8062593 ~ 8117249 (+)
G133832 NA non-coding upstream 96382 8079755 ~ 8100437 (+)
G133820 NA non-coding upstream 193307 8002780 ~ 8003512 (+)
G133783 NA non-coding upstream 353348 7830564 ~ 7843471 (+)
G133947 NA non-coding downstream 79346 8276375 ~ 8276580 (+)
G133961 NA non-coding downstream 252014 8449043 ~ 8578268 (+)
G134018 NA non-coding downstream 422478 8619507 ~ 8623220 (+)
G134019 NA non-coding downstream 427189 8624218 ~ 8627183 (+)
G134033 NA non-coding downstream 502382 8699411 ~ 8700618 (+)
G133822 NA other upstream 141798 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 159138 8028063 ~ 8037681 (+)
AMCG00011986 LOC107376962,LOC107102122,LOC103472755,LOC103153162,LOC106951371,LOC106916934 other upstream 220722 7960698 ~ 7976097 (+)
AMCG00011987 NA other upstream 268581 7925136 ~ 7928238 (+)
AMCG00011971 NA other upstream 621627 7559663 ~ 7575192 (+)
AMCG00012006 NA other downstream 181304 8378333 ~ 8397041 (+)
AMCG00012008 NA other downstream 312982 8510011 ~ 8520648 (+)
G133974 NA other downstream 364013 8561042 ~ 8563214 (+)
AMCG00012043 NA other downstream 1082959 9279988 ~ 9309931 (+)
G134291 NA other downstream 1454320 9651349 ~ 9653234 (+)

Expression


Co-expression Network