G134019


Basic Information

Item Value
gene id G134019
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 8624218 ~ 8627183 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168146
CGGCCTCGCTGACAAATTTCAGGCCTTTGGCAGAATTTGTACACAGtggtaaaatggtaaaatctCCCACAGGAAACGGGAGCAATTGCCAAGCTGACCGTTTTTTGCTAAGGTGAGGGGAGCTCTTAGGAGTGTCTTCATGAAGGGGCTCCGTAAAGACTCCATTTGCAGAACAAACTAAGGacagtatttcatatttctgtcAAGCGAACTACAACACTTCAAGAAACACTGTGCCGTGCAATTGAACAAAGGGCGACTTgtgaaagtatatatatatatgtgtgtgtgtgtgtgtgtgtgtttatttatgtctgcTAAGGCTTCAATTGGGTCATGGAAACCACAGTGATAGCGTGTTTATCATCAACAGTCTGGTTCTATAATTGTGTGCAATGGCTGGAATGATTCAAGTCCATGTCTGGCATTAGGAGATACCTACTCTCAAGAGATTGCCAAAACCTGTGTTCATGATCtatgtaattgtattgtcaTCATATGCATTTACGTTATATTGGCTTTAACTGCGCCCTAACATTTGCTGCGCTATAACCACCTGTGATTTGGTTcttggttttaatatttgattaaagATCTCCTaccaaatcatttaaaaaggctTCCCCATGAAACCAGGAATTCAAGAACGTCATTGAAGTTTTACCTTCACAATGTCTCCCTTGCCCTTCCACATGTCTACCACTCCTGCCCCTCTTTCTAAAATATTCTGTTCAACACCTATTAGTTCTTTTcacttatatatttaattaaatatctgcTTTTAATTAACTTCTGAGCTTCTCAATCAACTGTAATTCTGGAATGGAATATTTAGTGGTTTCCAATACAAAGGGAAATAATCCCATATTTTACTTGTAATActttttcacatatatatatatatatatatatatatgctactCCAATACATAATTTATGGATATGTGGGTGCCAACTATTCCTGATAATTGACACTGTCATATTTATCCATCTCATGATAGTTGCACCATTTGTGGTTAGTGAATTAATCGCTGATCTGGCGAGTTTGCAACCCACCAAAAGGCATGTCTCGGTTTTCAGCAAAGCaaaaatctctttaaaaagtgttaaatgttttcacGTTTTCATAGTTCAGTTGTTGCAAATTCATCACAATTTGATCCGCATTCAAATTTCTAAGTCTTAGGTCAGCTGCACCCCCCACAACACCCACCTCATTTGCACATCACAATACATATCAAATCAAACATACCGGGTCTGCAATATCAAGGCGAGGAACTACGATGGCCATATCACAACCGCTGCCACCCGGAGGACAACAGCCTCGCAGTGGTGGCTGGACGTTGTGTATGACGTTTCGTTTTTCCGGTAGGGGAGCACACTCGGGATACGGCGTCCGCGTATCACGCCAAGCACTGTAAACAACTCAAGAGCACATCACCATATATATCGGGAAGCATTCTGTATAGCGAGGGCTTAGAAACACTAAATGCAGACACAGATTTCACAGCCATCATGAAACAGGCAGTGCGCCACAATGTCAGTCCATCTCCAGATAAACATTTGTGGTCAAACTctttacaaacacaaagacagtgGATCTCTCAGTCTTACTACAGGGTGGGGTTTGTCACAGATACCAAGAGTCTCAGGATAAGGGcaattctctctcacacacagagagggaccACTATATAGAAGGAGCACCtccctgcatctctctctctctttctgtgtcttccTGCTCCGTGGAAAGTTGGGCGTCAGGCATCGTTGGACTTGATTGGCTGGTCAGTCGACTAGTTGGTAGGCTGTTAGTGCGTCTGTGTCATGTGTCAGTGGAGAGGGGTGGGCGATGGAGGGCAGGGGGTTGGGGAGAAGGAGGGGGTCGTGGTGCAAATGTCACCCACTTGAACCTCACACTTTCTTGGGGGGCGGGGCGAGCTTGATGATCTCTTCTTCCGAGGGTTGACGAATGATATCTTGTATTTCTTGGCGGAGGGGATGCGCGTCAGCTTGGTGTCGATCTCGTCGTCCTCGGAGATCTTGAGCACGGTGGTCCGGTACTCGATCACGCGGGTGAGCAAGTCCGGGCGCCGCGAGATCTCAAAGATGTGCTCGATGTAGGACAGGTTGT

Function

GO: NA

KEGG:

id description
ko04015 Rap1 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU168146 True 2137 lncRNA 0.44 3 8624218 8627183

Neighbor

gene id symbol gene type direction distance location
AMCG00012011 NA coding upstream 22342 8595016 ~ 8601876 (+)
AMCG00012010 NA coding upstream 36237 8587130 ~ 8587981 (+)
AMCG00012007 NA coding upstream 155390 8464205 ~ 8468828 (+)
AMCG00012004 NA coding upstream 195538 8426020 ~ 8428680 (+)
AMCG00012005 NA coding upstream 223015 8398026 ~ 8401203 (+)
AMCG00012016 NA coding downstream 43306 8670489 ~ 8670824 (+)
AMCG00012015 NA coding downstream 51721 8678904 ~ 8698447 (+)
AMCG00012014 NA coding downstream 99640 8726823 ~ 8730941 (+)
AMCG00012019 NA coding downstream 177918 8805101 ~ 8839751 (+)
AMCG00012023 NA coding downstream 221143 8848326 ~ 8866791 (+)
G134018 NA non-coding upstream 998 8619507 ~ 8623220 (+)
G133961 NA non-coding upstream 45950 8449043 ~ 8578268 (+)
G133947 NA non-coding upstream 347638 8276375 ~ 8276580 (+)
G133921 NA non-coding upstream 427189 8196819 ~ 8197029 (+)
G133833 NA non-coding upstream 499519 8120899 ~ 8124699 (+)
G134033 NA non-coding downstream 72228 8699411 ~ 8700618 (+)
G134034 NA non-coding downstream 75166 8702349 ~ 8702598 (+)
G134035 NA non-coding downstream 76566 8703749 ~ 8703968 (+)
G134068 NA non-coding downstream 175340 8802523 ~ 8802878 (+)
G134084 NA non-coding downstream 261534 8888717 ~ 8888946 (+)
G133974 NA other upstream 61004 8561042 ~ 8563214 (+)
AMCG00012008 NA other upstream 103570 8510011 ~ 8520648 (+)
AMCG00012006 NA other upstream 227177 8378333 ~ 8397041 (+)
G133822 NA other upstream 569197 8052124 ~ 8055021 (+)
AMCG00011993 NA other upstream 586537 8028063 ~ 8037681 (+)
AMCG00012043 NA other downstream 652805 9279988 ~ 9309931 (+)
G134291 NA other downstream 1024166 9651349 ~ 9653234 (+)
G134295 NA other downstream 1029174 9656357 ~ 9656727 (+)
G134338 NA other downstream 1225707 9852890 ~ 9867143 (+)
G134340 NA other downstream 1308743 9935926 ~ 9936411 (+)

Expression


Co-expression Network