G134340


Basic Information

Item Value
gene id G134340
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 9935926 ~ 9936411 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168607
AGTCAAGCTGAGGCTTCTCCAGAAGAGACAACATGAATCCCCTTGATGTTGTGCTTCTTCTTCTGCTGGGACTTGCAGTTGTTCCAGTGCAGTCCAGCATCACACTGACCCAGCCTGATACAGCAGATATTAAGAAGCCAGGAGAGTCTCTGAAACTGTCCTGCCGGGTTTCAGGGTTCACAATAGACAGCTATTATAAAGGCTGGATACGACAGGCTCCAGGAAAGGGCTTAGAATGGTTGGCCAGCTATGCTAATGAAGTCAATACTAAGTATTATGCAGATTCAATCAAAGGACGTTTTATTGCCTCCATTGACACCTCCTCCAGCACATTCTTCTTACAAATGAACAACCTGAAAGCTGAAGACACagctgtgtattactgtgcgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168607 True 391 TUCP 0.46 2 9935926 9936411

Neighbor

gene id symbol gene type direction distance location
AMCG00012069 LOC106569594,LOC108427136 coding upstream 216729 9712222 ~ 9719197 (+)
AMCG00012057 LOC107713649,LOC107698496,LOC107600231,LOC106569574,LOC105905623,LOC107676327 coding upstream 262565 9659749 ~ 9673361 (+)
AMCG00012067 NA coding upstream 292595 9635496 ~ 9643331 (+)
AMCG00012056 NA coding upstream 390941 9542014 ~ 9544985 (+)
AMCG00012055 NA coding upstream 401685 9508741 ~ 9534241 (+)
AMCG00012075 NA coding downstream 43479 9979890 ~ 9999729 (+)
AMCG00012076 NA coding downstream 63327 9999738 ~ 10004091 (+)
AMCG00012074 NA coding downstream 78433 10014844 ~ 10016191 (+)
AMCG00012079 tmem55b,LOC106569577,LOC107576828,LOC107721780 coding downstream 131145 10067556 ~ 10074742 (+)
AMCG00012078 NA coding downstream 161737 10098148 ~ 10100456 (+)
G134335 NA non-coding upstream 12909 9847522 ~ 9923017 (+)
G134326 NA non-coding upstream 165241 9769657 ~ 9770685 (+)
G134305 NA non-coding upstream 256824 9676778 ~ 9679102 (+)
G134292 eif3f,LOC105905622 non-coding upstream 281326 9653852 ~ 9654600 (+)
G134284 NA non-coding upstream 289482 9646026 ~ 9646444 (+)
G134350 LOC108239224 non-coding downstream 21940 9958351 ~ 10180707 (+)
G134369 NA non-coding downstream 257983 10194394 ~ 10244729 (+)
G134339 NA non-coding downstream 262740 10199151 ~ 10200970 (+)
G134378 NA non-coding downstream 333269 10269680 ~ 10270054 (+)
G134495 NA non-coding downstream 658438 10594849 ~ 10595406 (+)
G134338 NA other upstream 68783 9852890 ~ 9867143 (+)
G134295 NA other upstream 279199 9656357 ~ 9656727 (+)
G134291 NA other upstream 282692 9651349 ~ 9653234 (+)
AMCG00012043 NA other upstream 625995 9279988 ~ 9309931 (+)
G133974 NA other upstream 1372712 8561042 ~ 8563214 (+)
G134357 NA other downstream 97775 10034186 ~ 10034693 (+)
G134365 NA other downstream 197616 10134027 ~ 10134592 (+)
G134366 NA other downstream 203543 10139954 ~ 10140457 (+)
G134337 NA other downstream 286593 10223004 ~ 10259224 (+)
G134373 NA other downstream 316399 10252810 ~ 10307839 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026567 ighv5-1 coding NC_007114.7 CM002887.2 34106046 ~ 34106471 (-)