G134343


Basic Information

Item Value
gene id G134343
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10303273 ~ 10317818 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168610
CCAGCGGCCGCTCCTCCTTACTTAACCGGCAGCTGCGGCTCTTCTGTGGATCAGCAGGTCTCCAGCCAGTCTCTCAGAAACAGGCAACACTGAGCTCTGTGGGAACGATGCTGCCCGTACTTCTGTTTCTGTGGCTGACTGCTGCACCTCGTGTTGGGGGCCAGATtgtgctgacacagtctgaatCGGTGCTGAGTCAGCCAGGAGGGTCTGCCAAATTAACATGTGCCGTCTCTGGGTTTAGTGTCAGTGGTGCTTACATGTACTGGATCCGCCAGGCCCCTGGTAAAGGACTGGAATGGATAGTTTACTTCTACACCACATCTAGCAATAGCTACGCCTCGTCTGTCAAAGGAAGGTTCACGGCCTCCAGAGACAGCAGCAGTTTGTACTTGGACATGACCGACCTGAGAGCTGAAGACACTGGAGTCTATTACTGTGCGAGAGACACCGTGACACACGTGGTCTAAAGTCTGAGTCAAAATCCACCTGATCATCACAGTGCTGTTGTGGGGCATTTGGGGTCAATACTGTAACCACAGAACAAAATATGCTCATTAACATTAACTGAGTGCTGTACTGGAAGCAGGTAAATGATTTGATTAAATcaccttttttatatttgaaaaacttACCACAATTTAATTTCACCACACTATGAAGGTTTGAGTTTTTAAGACAAATGTTGCCTTAGGTTTGAAATAGCAGATGTCCCGATTAAATTAGAACTATATGTATTTCCTTATAGAATAGGTATGTAGTTAAAATTAGTATGTGTTTTGTTCTCAGGGTTATTTCTGAACACTAGTTATATATTGACATCATATGGCACTACAGAAAGAAGCTTGTTATTCATAATATAAACATGGAATATTATAATGTTCTATAGCTGTTCTACatatagttaaataaaaaaatactatctttagtactttaaatattttgaaagtctTTAATACATTGCATGTATGGATTCTCtaatacattacataatttaatgaggatgtatttaaacagaaagGACAACATTAAACATGAATACTGTTCTAAATAGCTGTTTCTTCAGTCTATGCCAT

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
TU168610 True 1076 TUCP 0.40 3 10303273 10317818

Neighbor

gene id symbol gene type direction distance location
AMCG00012082 NA coding upstream 22741 10265100 ~ 10280532 (+)
AMCG00012078 NA coding upstream 202817 10098148 ~ 10100456 (+)
AMCG00012079 tmem55b,LOC106569577,LOC107576828,LOC107721780 coding upstream 228531 10067556 ~ 10074742 (+)
AMCG00012074 NA coding upstream 287082 10014844 ~ 10016191 (+)
AMCG00012076 NA coding upstream 299182 9999738 ~ 10004091 (+)
AMCG00012083 NA coding downstream 21010 10338828 ~ 10353743 (+)
AMCG00012084 NA coding downstream 46138 10363956 ~ 10392598 (+)
AMCG00012087 LOC101065589 coding downstream 225595 10543413 ~ 10545945 (+)
AMCG00012086 LOC107749202,LOC104951120,LOC107733393 coding downstream 233852 10551670 ~ 10564853 (+)
AMCG00012089 NA coding downstream 342084 10659902 ~ 10668786 (+)
G134378 NA non-coding upstream 33219 10269680 ~ 10270054 (+)
G134369 NA non-coding upstream 58544 10194394 ~ 10244729 (+)
G134339 NA non-coding upstream 102303 10199151 ~ 10200970 (+)
G134350 LOC108239224 non-coding upstream 122566 9958351 ~ 10180707 (+)
G134341 NA non-coding upstream 356784 9927912 ~ 9946489 (+)
G134495 NA non-coding downstream 277031 10594849 ~ 10595406 (+)
G134498 NA non-coding downstream 280721 10598539 ~ 10598841 (+)
G134556 NA non-coding downstream 532040 10849858 ~ 10853291 (+)
G134615 NA non-coding downstream 649458 10967276 ~ 10982794 (+)
G134692 NA non-coding downstream 915863 11233681 ~ 11233883 (+)
G134337 NA other upstream 44049 10223004 ~ 10259224 (+)
G134366 NA other upstream 162816 10139954 ~ 10140457 (+)
G134365 NA other upstream 168681 10134027 ~ 10134592 (+)
G134357 NA other upstream 268580 10034186 ~ 10034693 (+)
G134340 NA other upstream 366862 9935926 ~ 9936411 (+)
AMCG00012088 NA other downstream 311866 10629684 ~ 10684097 (+)
G134613 NA other downstream 608788 10926606 ~ 10935107 (+)
AMCG00012112 NA other downstream 731247 11049065 ~ 11061030 (+)
G134697 fus,LOC103040960,LOC107658502 other downstream 924411 11242229 ~ 11293899 (+)
G134743 NA other downstream 1118561 11436379 ~ 11446163 (+)

Expression


Co-expression Network