G134404


Basic Information

Item Value
gene id G134404
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10200802 ~ 10201225 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168695
GAGGAGTCCATGCAAAGTCAGAGGGCTTCCTGCTTCATTTATCTCACTGCACTGAAGGAGACACAGTGAATGTGCAGACTGCCTAGACTGAAGTCTCATTACTGCCATCTCAACCTCAAACAATGGCCAGTCTAACTGCAATTATTATAGCGGCCACATGTTTAACAGGTGTTCAGTCCCAGATCGTGCTGACTGAGTCTGAGGCAGCTGTTAAAAAGCTTGGAGAATCCCACACATTGTCCTGTACAGCCTCAGGATTTACATTCAGTAGCTATAACATGGGCTGGGTTAGACAGGCTCCTGGGAAGGGGCTGGAATGGGTGGCTGAAATTAACAG

Function

GO:

id name namespace
GO:0050900 leukocyte migration biological_process
GO:0002376 immune system process biological_process
GO:0030595 leukocyte chemotaxis biological_process
GO:0045321 leukocyte activation biological_process
GO:0060326 cell chemotaxis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168695 True 337 lncRNA 0.48 2 10200802 10201225

Neighbor

gene id symbol gene type direction distance location
AMCG00012080 NA coding downstream 107865 10080716 ~ 10092937 (-)
AMCG00012077 NA coding downstream 139333 10044620 ~ 10061469 (-)
AMCG00012073 NA coding downstream 225551 9970993 ~ 9975251 (-)
AMCG00012072 NA coding downstream 310056 9886410 ~ 9890746 (-)
AMCG00012070 NA coding downstream 426761 9768512 ~ 9774041 (-)
AMCG00012081 NA coding upstream 4247 10205472 ~ 10206762 (-)
AMCG00012085 NA coding upstream 165864 10367089 ~ 10436690 (-)
AMCG00012093 atp1a2a,LOC107692876,LOC107749099,LOC107721700,LOC102222505,LOC100136182,LOC106569580 coding upstream 364985 10566210 ~ 10582453 (-)
AMCG00012090 NA coding upstream 386357 10587582 ~ 10591854 (-)
AMCG00012091 NA coding upstream 391657 10592882 ~ 10596371 (-)
G134405 NA non-coding downstream 254313 9936100 ~ 9946489 (-)
G134396 NA non-coding downstream 401356 9792310 ~ 9799446 (-)
G134298 NA non-coding downstream 544157 9656356 ~ 9656645 (-)
G134226 NA non-coding downstream 784344 9414316 ~ 9416458 (-)
G134143 NA non-coding downstream 1009510 9154436 ~ 9191292 (-)
G134443 NA non-coding upstream 24402 10225627 ~ 10287129 (-)
G134451 NA non-coding upstream 102344 10303569 ~ 10306027 (-)
G134648 NA non-coding upstream 766051 10967276 ~ 10982791 (-)
G134819 NA non-coding upstream 1194735 11395960 ~ 11400701 (-)
G134817 NA non-coding upstream 1295450 11496675 ~ 11769509 (-)
G134435 NA other downstream 45594 10154665 ~ 10155208 (-)
G134403 NA other downstream 241929 9958245 ~ 9958873 (-)
G134411 NA other downstream 244442 9955851 ~ 9956360 (-)
G134400 NA other downstream 352696 9847541 ~ 9848106 (-)
G134395 NA other downstream 409454 9790841 ~ 9791348 (-)
G134441 NA other upstream 10917 10212142 ~ 10230443 (-)
G134445 NA other upstream 49046 10250271 ~ 10251115 (-)
G134447 NA other upstream 54301 10255526 ~ 10256038 (-)
G134581 NA other upstream 528550 10729775 ~ 10811881 (-)
AMCG00012111 NA other upstream 733707 10934932 ~ 10961871 (-)

Expression


Co-expression Network