G134451


Basic Information

Item Value
gene id G134451
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10303569 ~ 10306027 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168754
CCGTGTTTCCTCTGGTGCAGAGCTAATTACATAATTCACATAAATGTGCCATAACAATGTTGGAGAAAGTTGAATAATATCTATTCAAGCTTCACTGCTTTTgacataatatttatattggCCATATAGGCATATGCTCTTCAGACTTTTATTTCTGGGAGCATTTTGCAATTGCCTTGGAAAGGTTaatctgaatctgaaattaCGGGTGGACTGAAGTACAGGATGGACTGAACCACAAGGTAAacttatttaatgtgtttaatacacctttaaatgaacaataatgTGCTTTGTTGTGCAGTGAGGCTCTAATGACAGTGTTATCAGCTAAATCTGTTACAAACAGGGTATTACATGAATATTTGTCACAGGGTGTGTAAAATGTTGGTGCATGTTATGAATGAACCAGTTCTGTCATTGAAAATACacagtgctgtttgttttgcaatcATTTACTCATATATCCAATTCTGTTTCCCCAGAGGAGCAGGATTTGAAGCTCTTGAATACATGCTGTGGTCAGTGGGATTTCTCTGTACTGTCTGTGCCTCTGGCAAGGGGTTTTTGTACGGGGGTTTATCACTGTGGCCATACCAAGCACTACTATATCTCGCACAGTAATAGACTCCAGTGTCTTCAGCTCTCAGGTCGGTCATGTCCAAGTACAAACTGCTGCTGTCTTTGGAGGCCGTGAACCTTCCTTTGACAGACGAGGCGTAGCTATTGCTAGATGTGGAGTAGAAGTAAACTATCCACTCCAGTCCTTTACCAGGAGCCTGGCGGATCCAGTACATGTAAGCACCACTGACACTAAACCCAGAGACGGCACATGTTAATTTGGCAGACCCTCCTGGCTGACTCAGCACCGattcagactgtgtcagcacaATCTGGCCCCCAACACCTAGAGaaag

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
TU168754 True 917 lncRNA 0.42 2 10303569 10306027

Neighbor

gene id symbol gene type direction distance location
AMCG00012081 NA coding downstream 96807 10205472 ~ 10206762 (-)
AMCG00012080 NA coding downstream 210632 10080716 ~ 10092937 (-)
AMCG00012077 NA coding downstream 242100 10044620 ~ 10061469 (-)
AMCG00012073 NA coding downstream 328318 9970993 ~ 9975251 (-)
AMCG00012072 NA coding downstream 412823 9886410 ~ 9890746 (-)
AMCG00012085 NA coding upstream 61062 10367089 ~ 10436690 (-)
AMCG00012093 atp1a2a,LOC107692876,LOC107749099,LOC107721700,LOC102222505,LOC100136182,LOC106569580 coding upstream 260183 10566210 ~ 10582453 (-)
AMCG00012090 NA coding upstream 281555 10587582 ~ 10591854 (-)
AMCG00012091 NA coding upstream 286855 10592882 ~ 10596371 (-)
AMCG00012092 myp0,LOC106600490 coding upstream 328563 10634590 ~ 10650309 (-)
G134443 NA non-coding downstream 16440 10225627 ~ 10287129 (-)
G134404 NA non-coding downstream 102344 10200802 ~ 10201225 (-)
G134405 NA non-coding downstream 357080 9936100 ~ 9946489 (-)
G134396 NA non-coding downstream 504123 9792310 ~ 9799446 (-)
G134298 NA non-coding downstream 646924 9656356 ~ 9656645 (-)
G134648 NA non-coding upstream 661249 10967276 ~ 10982791 (-)
G134819 NA non-coding upstream 1089933 11395960 ~ 11400701 (-)
G134817 NA non-coding upstream 1190648 11496675 ~ 11769509 (-)
G134840 NA non-coding upstream 1254070 11560097 ~ 11795338 (-)
G134844 NA non-coding upstream 1297496 11603523 ~ 11604157 (-)
G134447 NA other downstream 47531 10255526 ~ 10256038 (-)
G134445 NA other downstream 52454 10250271 ~ 10251115 (-)
G134397 NA other downstream 58645 9809798 ~ 10244924 (-)
G134441 NA other downstream 73126 10212142 ~ 10230443 (-)
G134406 NA other downstream 80350 10176920 ~ 10223219 (-)
G134581 NA other upstream 423748 10729775 ~ 10811881 (-)
AMCG00012111 NA other upstream 628905 10934932 ~ 10961871 (-)
G134803 NA other upstream 1024439 11330466 ~ 11386979 (-)
AMCG00012171 NA other upstream 1767977 12074004 ~ 12107414 (-)
AMCG00012170 NA other upstream 1803513 12109540 ~ 12122725 (-)

Expression


Co-expression Network