G134495


Basic Information

Item Value
gene id G134495
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10594849 ~ 10595406 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU168804
CTGCCTCAATCTTAAGCAGTTCCCTCTGGATGTCCCGTGCAAATTCAGCCACCGATTTTCTCAGCGTGCCCAGAAATGGGTCTGTCTCAACAGTGAGGCAGGAGCAATCTGGAATTGTGCTGAGAGACTGGAAATACGAAACACAAAAACGAGTAGGATGTCCATTGTAAGTTTcgataataacacatttaaatgaaaaacaacaataaaacaacaatatatatgtgtatgtgtaagtaAACAATTATATCAACCCTCTGCAGGAAGAAACAAGTGCTACAGAGGTAAGTTTGACCATAAGTCCCTGACACTATTTTGAGGGTCACCCCTGGAAAGTGGACGTGGTTGTCAGTCTGTGGGAGTGCCTCCAGCCCCCTGTGCCTCCTTCTCAGCTGGTCAATTTCCTGCTCCAGCCGCAGAATGAGCCCCTGAGCCTGTATCACCGCTGCCTTTTTCTTGACCTCGATCCGCTGGGCAAACTCCGCCTGGCTCGTGTCGATGGAGCACCTCAGGGCATCAAACACCCGGCTGCTGTGGTTGATCTCCCTGCTGGCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168804 True 558 lncRNA 0.49 1 10594849 10595406

Neighbor

gene id symbol gene type direction distance location
AMCG00012086 LOC107749202,LOC104951120,LOC107733393 coding upstream 29996 10551670 ~ 10564853 (+)
AMCG00012087 LOC101065589 coding upstream 48904 10543413 ~ 10545945 (+)
AMCG00012084 NA coding upstream 202251 10363956 ~ 10392598 (+)
AMCG00012083 NA coding upstream 241106 10338828 ~ 10353743 (+)
AMCG00012082 NA coding upstream 314317 10265100 ~ 10280532 (+)
AMCG00012089 NA coding downstream 64496 10659902 ~ 10668786 (+)
AMCG00012096 NA coding downstream 172638 10768044 ~ 10777082 (+)
AMCG00012097 NA coding downstream 198480 10793886 ~ 10796475 (+)
AMCG00012098 NA coding downstream 207962 10803368 ~ 10804229 (+)
AMCG00012099 NA coding downstream 217291 10812697 ~ 10816328 (+)
G134346 NA non-coding upstream 166325 9886858 ~ 10428524 (+)
G134378 NA non-coding upstream 324795 10269680 ~ 10270054 (+)
G134369 NA non-coding upstream 350120 10194394 ~ 10244729 (+)
G134339 NA non-coding upstream 393879 10199151 ~ 10200970 (+)
G134350 LOC108239224 non-coding upstream 414142 9958351 ~ 10180707 (+)
G134498 NA non-coding downstream 3133 10598539 ~ 10598841 (+)
G134556 NA non-coding downstream 254452 10849858 ~ 10853291 (+)
G134615 NA non-coding downstream 371870 10967276 ~ 10982794 (+)
G134692 NA non-coding downstream 638275 11233681 ~ 11233883 (+)
G134698 NA non-coding downstream 704928 11300334 ~ 11302065 (+)
G134343 NA other upstream 277031 10303273 ~ 10317818 (+)
G134373 NA other upstream 287010 10252810 ~ 10307839 (+)
G134337 NA other upstream 335625 10223004 ~ 10259224 (+)
G134366 NA other upstream 454392 10139954 ~ 10140457 (+)
G134365 NA other upstream 460257 10134027 ~ 10134592 (+)
AMCG00012088 NA other downstream 34278 10629684 ~ 10684097 (+)
G134613 NA other downstream 331200 10926606 ~ 10935107 (+)
AMCG00012112 NA other downstream 453659 11049065 ~ 11061030 (+)
G134697 fus,LOC103040960,LOC107658502 other downstream 646823 11242229 ~ 11293899 (+)
G134743 NA other downstream 840973 11436379 ~ 11446163 (+)

Expression


Co-expression Network